Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0532
         (628 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          23   2.4  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   3.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.8  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   9.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.8  

>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -3

Query: 107 TNFKAAILH-DLVLNITSLVTRQK 39
           TN K+ + H D     TSLVTRQK
Sbjct: 113 TNRKSVVFHHDNARPHTSLVTRQK 136


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -3

Query: 107 TNFKAAILH-DLVLNITSLVTRQK 39
           TN K  + H D     TSLVTRQK
Sbjct: 235 TNRKGVVFHHDNARPHTSLVTRQK 258


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +3

Query: 150 TLYT*KSKLSRRGLKDKKSDAFVLSDARGVRIPQAVPIFLMKYVLNIC 293
           T+Y    +  R  L  ++  A  L    GV +   +P FLM  ++  C
Sbjct: 306 TVYQFIEERQRISLSKERRAARTLGVIMGVFVVCWLPFFLMYVIVPFC 353


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +3

Query: 150 TLYT*KSKLSRRGLKDKKSDAFVLSDARGVRIPQAVPIFLMKYVLNIC 293
           T+Y    +  R  L  ++  A  L    GV +   +P FLM  ++  C
Sbjct: 306 TVYQFIEERQRISLSKERRAARTLGVIMGVFVVCWLPFFLMYVIVPFC 353


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +1

Query: 82  CNIAALKLVCYY*LFSLF 135
           C IA L L  YY L S F
Sbjct: 9   CGIAVLFLALYYYLTSTF 26


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +3

Query: 150 TLYT*KSKLSRRGLKDKKSDAFVLSDARGVRIPQAVPIFLMKYVLNIC 293
           T+Y    +  R  L  ++  A  L    GV +   +P FLM  ++  C
Sbjct: 306 TVYQFIEERQRISLSKERRAARTLGVIMGVFVVCWLPFFLMYVIVPFC 353


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 460  SNRNALLLHGKNRKGGGTHSCGLT 389
            S  +++LLH K+   GG    G T
Sbjct: 1415 STSSSILLHWKSGHNGGASLTGYT 1438


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 460  SNRNALLLHGKNRKGGGTHSCGLT 389
            S  +++LLH K+   GG    G T
Sbjct: 1411 STSSSILLHWKSGHNGGASLTGYT 1434


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,800
Number of Sequences: 438
Number of extensions: 4012
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)