Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0532
         (628 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g43340.1 68415.m05389 expressed protein                             29   3.3  
At2g41480.1 68415.m05124 peroxidase, putative similar to peroxid...    29   3.3  
At1g05250.1 68414.m00531 peroxidase, putative similar to peroxid...    29   3.3  
At1g05240.1 68414.m00530 peroxidase, putative similar to peroxid...    29   3.3  
At4g36140.1 68417.m05144 disease resistance protein (TIR-NBS-LRR...    27   7.7  
At4g08180.3 68417.m01353 oxysterol-binding family protein simila...    27   7.7  
At4g08180.2 68417.m01352 oxysterol-binding family protein simila...    27   7.7  
At4g08180.1 68417.m01351 oxysterol-binding family protein simila...    27   7.7  

>At2g43340.1 68415.m05389 expressed protein
          Length = 189

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 349 CDLIFISRCYSFTVEVNSEHMLST 278
           CD  F+SRC S+  +V+S+  +ST
Sbjct: 2   CDSDFLSRCSSYEADVDSDSEIST 25


>At2g41480.1 68415.m05124 peroxidase, putative similar to peroxidase
           [Spinacia oleracea] gi|1781334|emb|CAA71494
          Length = 328

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 343 LIFISRCYSFTVEVNSEHMLSTYFIRKIGTAC 248
           L F  R Y+FTV  NS+  +S  F+ ++ T C
Sbjct: 199 LFFRYRLYNFTVTGNSDPTISPSFLTQLKTLC 230


>At1g05250.1 68414.m00531 peroxidase, putative similar to
           peroxidase; peroxidase ATP11a [Arabidopsis thaliana]
           gi|1546688|emb|CAA67334
          Length = 325

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -1

Query: 331 SRCYSFTVEVNSEHMLSTYFIRKIGTACGIRTPRASLNTNASDFLSF 191
           SR Y+FT + +S+  ++  ++R++   C     R SLN +    L+F
Sbjct: 203 SRLYNFTGKGDSDPSMNPSYVRELKRKCPPTDFRTSLNMDPGSALTF 249


>At1g05240.1 68414.m00530 peroxidase, putative similar to
           peroxidase; peroxidase ATP11a [Arabidopsis thaliana]
           gi|1546688|emb|CAA67334
          Length = 325

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -1

Query: 331 SRCYSFTVEVNSEHMLSTYFIRKIGTACGIRTPRASLNTNASDFLSF 191
           SR Y+FT + +S+  ++  ++R++   C     R SLN +    L+F
Sbjct: 203 SRLYNFTGKGDSDPSMNPSYVRELKRKCPPTDFRTSLNMDPGSALTF 249


>At4g36140.1 68417.m05144 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1607

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +3

Query: 450 FRFEGWGSRCNYTETLELISKVSGIYVIY 536
           FR +G  +  NY+ETL++I +VS   +++
Sbjct: 458 FRRKGISAFVNYSETLDVIERVSASVLVF 486


>At4g08180.3 68417.m01353 oxysterol-binding family protein similar
           to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
           contains Pfam profiles PF00169: PH domain, PF01237:
           Oxysterol-binding protein
          Length = 813

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 457 NRNALLLHGKNRKGGGTHSCGLTRSPY 377
           + +A ++   NR+GG + SC L R P+
Sbjct: 158 DESARMISRHNRRGGSSSSCQLRRKPF 184


>At4g08180.2 68417.m01352 oxysterol-binding family protein similar
           to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
           contains Pfam profiles PF00169: PH domain, PF01237:
           Oxysterol-binding protein
          Length = 813

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 457 NRNALLLHGKNRKGGGTHSCGLTRSPY 377
           + +A ++   NR+GG + SC L R P+
Sbjct: 158 DESARMISRHNRRGGSSSSCQLRRKPF 184


>At4g08180.1 68417.m01351 oxysterol-binding family protein similar
           to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
           contains Pfam profiles PF00169: PH domain, PF01237:
           Oxysterol-binding protein
          Length = 814

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 457 NRNALLLHGKNRKGGGTHSCGLTRSPY 377
           + +A ++   NR+GG + SC L R P+
Sbjct: 158 DESARMISRHNRRGGSSSSCQLRRKPF 184


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,919,219
Number of Sequences: 28952
Number of extensions: 271605
Number of successful extensions: 461
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 461
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)