Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0531
(620 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118965-1|AAM50825.1| 422|Drosophila melanogaster LD44267p pro... 44 2e-04
AE014297-543|AAF54075.1| 422|Drosophila melanogaster CG1105-PA ... 44 2e-04
AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3.... 31 0.95
AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan pro... 31 0.95
AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB... 31 0.95
AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD... 31 0.95
AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA... 31 0.95
AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE... 31 0.95
AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC... 31 0.95
AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF... 31 0.95
AE013599-1448|AAM68666.1| 1740|Drosophila melanogaster CG8487-PA... 30 2.2
AE013599-1447|AAF58532.2| 1983|Drosophila melanogaster CG8487-PB... 30 2.2
BT023778-1|AAZ41787.1| 2016|Drosophila melanogaster LD21067p pro... 29 5.1
AY128444-1|AAM75037.1| 1332|Drosophila melanogaster LD21041p pro... 29 5.1
AE014134-1407|AAF52607.1| 2016|Drosophila melanogaster CG8552-PA... 29 5.1
X03636-1|CAA27285.1| 1127|Drosophila melanogaster per protein pr... 28 8.9
M30114-3|AAA28753.1| 1176|Drosophila melanogaster biological clo... 28 8.9
M30114-1|AAA28754.1| 1218|Drosophila melanogaster biological clo... 28 8.9
D00009-1|BAA00007.1| 570|Drosophila melanogaster proteoglycan p... 28 8.9
AL024485-7|CAA19677.1| 1156|Drosophila melanogaster EG:155E2.4,F... 28 8.9
AL024485-4|CAA19678.1| 1212|Drosophila melanogaster EG:155E2.4,F... 28 8.9
AF033029-1|AAB87476.1| 1224|Drosophila melanogaster period clock... 28 8.9
AE014298-440|AAF45804.1| 1218|Drosophila melanogaster CG2647-PA ... 28 8.9
AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-P... 28 8.9
>AY118965-1|AAM50825.1| 422|Drosophila melanogaster LD44267p
protein.
Length = 422
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 54 SLYPTLTEPVYKESPYSVRTIQDRGDSNHT-MIRTPNFAPYYPTY 185
SLYP + P + E+ Y TI R DS HT MI FAP YPT+
Sbjct: 366 SLYPNIPPPQFVETQYRAPTIAGRDDSEHTQMIGDGAFAPRYPTF 410
>AE014297-543|AAF54075.1| 422|Drosophila melanogaster CG1105-PA
protein.
Length = 422
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 54 SLYPTLTEPVYKESPYSVRTIQDRGDSNHT-MIRTPNFAPYYPTY 185
SLYP + P + E+ Y TI R DS HT MI FAP YPT+
Sbjct: 366 SLYPNIPPPQFVETQYRAPTIAGRDDSEHTQMIGDGAFAPRYPTF 410
>AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3.1
protein.
Length = 2447
Score = 31.5 bits (68), Expect = 0.95
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 516 ICTGKRYFTVTWRSENLTRCGDNRKQTNCLP 608
+C+ + TWR + CGDN +T+C P
Sbjct: 1266 MCSNSKCVDRTWRCDGENDCGDNSDETSCDP 1296
>AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan protein.
Length = 4223
Score = 31.5 bits (68), Expect = 0.95
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 516 ICTGKRYFTVTWRSENLTRCGDNRKQTNCLP 608
+C+ + TWR + CGDN +T+C P
Sbjct: 1257 MCSNSKCVDRTWRCDGENDCGDNSDETSCDP 1287
>AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB,
isoform B protein.
Length = 3215
Score = 31.5 bits (68), Expect = 0.95
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 516 ICTGKRYFTVTWRSENLTRCGDNRKQTNCLP 608
+C+ + TWR + CGDN +T+C P
Sbjct: 1151 MCSNSKCVDRTWRCDGENDCGDNSDETSCDP 1181
>AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD,
isoform D protein.
Length = 4223
Score = 31.5 bits (68), Expect = 0.95
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 516 ICTGKRYFTVTWRSENLTRCGDNRKQTNCLP 608
+C+ + TWR + CGDN +T+C P
Sbjct: 1257 MCSNSKCVDRTWRCDGENDCGDNSDETSCDP 1287
>AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA,
isoform A protein.
Length = 4179
Score = 31.5 bits (68), Expect = 0.95
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 516 ICTGKRYFTVTWRSENLTRCGDNRKQTNCLP 608
+C+ + TWR + CGDN +T+C P
Sbjct: 1151 MCSNSKCVDRTWRCDGENDCGDNSDETSCDP 1181
>AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE,
isoform E protein.
Length = 4228
Score = 31.5 bits (68), Expect = 0.95
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 516 ICTGKRYFTVTWRSENLTRCGDNRKQTNCLP 608
+C+ + TWR + CGDN +T+C P
Sbjct: 1151 MCSNSKCVDRTWRCDGENDCGDNSDETSCDP 1181
>AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC,
isoform C protein.
Length = 4117
Score = 31.5 bits (68), Expect = 0.95
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 516 ICTGKRYFTVTWRSENLTRCGDNRKQTNCLP 608
+C+ + TWR + CGDN +T+C P
Sbjct: 1151 MCSNSKCVDRTWRCDGENDCGDNSDETSCDP 1181
>AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF,
isoform F protein.
Length = 4629
Score = 31.5 bits (68), Expect = 0.95
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 516 ICTGKRYFTVTWRSENLTRCGDNRKQTNCLP 608
+C+ + TWR + CGDN +T+C P
Sbjct: 1663 MCSNSKCVDRTWRCDGENDCGDNSDETSCDP 1693
>AE013599-1448|AAM68666.1| 1740|Drosophila melanogaster CG8487-PA,
isoform A protein.
Length = 1740
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 140 HYDTHAKLRSVLSYVCSYSTTPASSVKASEP-PASKSSQENCKISISYCISEKFRKYYFL 316
HY+ H+ +++ +C + TT SSV+ EP PA+ +Q+ ++ R + L
Sbjct: 912 HYNLHSDFDALVLTLCKF-TTLLSSVEQHEPAPANNETQQAVNFGLNGKAQAAMRTVFLL 970
Query: 317 V 319
V
Sbjct: 971 V 971
>AE013599-1447|AAF58532.2| 1983|Drosophila melanogaster CG8487-PB,
isoform B protein.
Length = 1983
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 140 HYDTHAKLRSVLSYVCSYSTTPASSVKASEP-PASKSSQENCKISISYCISEKFRKYYFL 316
HY+ H+ +++ +C + TT SSV+ EP PA+ +Q+ ++ R + L
Sbjct: 912 HYNLHSDFDALVLTLCKF-TTLLSSVEQHEPAPANNETQQAVNFGLNGKAQAAMRTVFLL 970
Query: 317 V 319
V
Sbjct: 971 V 971
>BT023778-1|AAZ41787.1| 2016|Drosophila melanogaster LD21067p
protein.
Length = 2016
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 200 TPASSVKASEPPASKSSQEN 259
TPASS ++S PPASK QE+
Sbjct: 898 TPASSSESSVPPASKVDQED 917
>AY128444-1|AAM75037.1| 1332|Drosophila melanogaster LD21041p
protein.
Length = 1332
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 200 TPASSVKASEPPASKSSQEN 259
TPASS ++S PPASK QE+
Sbjct: 214 TPASSSESSVPPASKVDQED 233
>AE014134-1407|AAF52607.1| 2016|Drosophila melanogaster CG8552-PA
protein.
Length = 2016
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 200 TPASSVKASEPPASKSSQEN 259
TPASS ++S PPASK QE+
Sbjct: 898 TPASSSESSVPPASKVDQED 917
>X03636-1|CAA27285.1| 1127|Drosophila melanogaster per protein
protein.
Length = 1127
Score = 28.3 bits (60), Expect = 8.9
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 36 SQPPFQSLYPTLTEPVYKESPYSVRTIQDRGDSNHTMIRTPNF--APYYPTYAAIQPPPL 209
S P S YPT T+ + P+SV I S HT + +F A +PT+ I
Sbjct: 823 SSTPGPSSYPTCTQNINLWPPFSV-GITPPVHSTHTAMAQSSFSSAGLFPTFYYIPASLT 881
Query: 210 PQ*KPRSLQQANH 248
P RS + H
Sbjct: 882 PTSPTRSPRMHKH 894
>M30114-3|AAA28753.1| 1176|Drosophila melanogaster biological clock
protein C protein.
Length = 1176
Score = 28.3 bits (60), Expect = 8.9
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 36 SQPPFQSLYPTLTEPVYKESPYSVRTIQDRGDSNHTMIRTPNF--APYYPTYAAIQPPPL 209
S P S YPT T+ + P+SV I S HT + +F A +PT+ I
Sbjct: 914 SSTPGPSSYPTCTQNINLWPPFSV-GITPPVHSTHTAMAQSSFSSAGLFPTFYYIPASLT 972
Query: 210 PQ*KPRSLQQANH 248
P RS + H
Sbjct: 973 PTSPTRSPRMHKH 985
>M30114-1|AAA28754.1| 1218|Drosophila melanogaster biological clock
protein A protein.
Length = 1218
Score = 28.3 bits (60), Expect = 8.9
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 36 SQPPFQSLYPTLTEPVYKESPYSVRTIQDRGDSNHTMIRTPNF--APYYPTYAAIQPPPL 209
S P S YPT T+ + P+SV I S HT + +F A +PT+ I
Sbjct: 914 SSTPGPSSYPTCTQNINLWPPFSV-GITPPVHSTHTAMAQSSFSSAGLFPTFYYIPASLT 972
Query: 210 PQ*KPRSLQQANH 248
P RS + H
Sbjct: 973 PTSPTRSPRMHKH 985
>D00009-1|BAA00007.1| 570|Drosophila melanogaster proteoglycan
protein.
Length = 570
Score = 28.3 bits (60), Expect = 8.9
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 36 SQPPFQSLYPTLTEPVYKESPYSVRTIQDRGDSNHTMIRTPNF--APYYPTYAAIQPPPL 209
S P S YPT T+ + P+SV I S HT + +F A +PT+ I
Sbjct: 415 SSTPGPSSYPTCTQNINLWPPFSV-GITPPVHSTHTAMAQSSFSSAGLFPTFYYIPASLT 473
Query: 210 PQ*KPRSLQQANH 248
P RS + H
Sbjct: 474 PTSPTRSPRMHKH 486
>AL024485-7|CAA19677.1| 1156|Drosophila melanogaster
EG:155E2.4,FBgn0003068;per protein.
Length = 1156
Score = 28.3 bits (60), Expect = 8.9
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 36 SQPPFQSLYPTLTEPVYKESPYSVRTIQDRGDSNHTMIRTPNF--APYYPTYAAIQPPPL 209
S P S YPT T+ + P+SV I S HT + +F A +PT+ I
Sbjct: 846 SSTPGPSSYPTCTQNINLWPPFSV-GITPPVHSTHTAMAQSSFSSAGLFPTFYYIPASLT 904
Query: 210 PQ*KPRSLQQANH 248
P RS + H
Sbjct: 905 PTSPTRSPRMHKH 917
>AL024485-4|CAA19678.1| 1212|Drosophila melanogaster
EG:155E2.4,FBgn0003068;per protein.
Length = 1212
Score = 28.3 bits (60), Expect = 8.9
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 36 SQPPFQSLYPTLTEPVYKESPYSVRTIQDRGDSNHTMIRTPNF--APYYPTYAAIQPPPL 209
S P S YPT T+ + P+SV I S HT + +F A +PT+ I
Sbjct: 908 SSTPGPSSYPTCTQNINLWPPFSV-GITPPVHSTHTAMAQSSFSSAGLFPTFYYIPASLT 966
Query: 210 PQ*KPRSLQQANH 248
P RS + H
Sbjct: 967 PTSPTRSPRMHKH 979
>AF033029-1|AAB87476.1| 1224|Drosophila melanogaster period clock
protein protein.
Length = 1224
Score = 28.3 bits (60), Expect = 8.9
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 36 SQPPFQSLYPTLTEPVYKESPYSVRTIQDRGDSNHTMIRTPNF--APYYPTYAAIQPPPL 209
S P S YPT T+ + P+SV I S HT + +F A +PT+ I
Sbjct: 920 SSTPGPSSYPTCTQNINLWPPFSV-GITPPVHSTHTAMAQSSFSSAGLFPTFYYIPASLT 978
Query: 210 PQ*KPRSLQQANH 248
P RS + H
Sbjct: 979 PTSPTRSPRMHKH 991
>AE014298-440|AAF45804.1| 1218|Drosophila melanogaster CG2647-PA
protein.
Length = 1218
Score = 28.3 bits (60), Expect = 8.9
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 36 SQPPFQSLYPTLTEPVYKESPYSVRTIQDRGDSNHTMIRTPNF--APYYPTYAAIQPPPL 209
S P S YPT T+ + P+SV I S HT + +F A +PT+ I
Sbjct: 914 SSTPGPSSYPTCTQNINLWPPFSV-GITPPVHSTHTAMAQSSFSSAGLFPTFYYIPASLT 972
Query: 210 PQ*KPRSLQQANH 248
P RS + H
Sbjct: 973 PTSPTRSPRMHKH 985
>AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-PA
protein.
Length = 2465
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 117 QDRGDSNHTMIRTPNFAPYYPTYAAIQPPPLPQ*KPRSLQQAN 245
Q + H+ + P +PY +QPP +P +P + QA+
Sbjct: 1557 QSPAEQQHSPYQQPVLSPYQQPQQQVQPPVVPPVQPSAGAQAS 1599
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,024,008
Number of Sequences: 53049
Number of extensions: 485009
Number of successful extensions: 1809
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1809
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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