Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0526
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   5.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.1  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   7.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   9.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.3  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 385 VQYFCLILLL*LVAYRFSV 441
           VQ+FC ++ L L  Y+ S+
Sbjct: 255 VQFFCSLVALCLTMYKLSL 273


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
 Frame = +3

Query: 120 CVDSATRRRHERVLIKFIDHSSC---FGSQQPTKTPSEP 227
           C++    RRH +  I  +  S+C    GS Q    P+ P
Sbjct: 60  CINQRCERRHIKGAIPVVSLSTCSMLCGSTQLWPQPTGP 98


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
 Frame = -1

Query: 349 RGPPESPLQ---VLRPLEPSTQ 293
           RGPP +PLQ   V   L+P  Q
Sbjct: 58  RGPPRTPLQPKLVAGKLKPKRQ 79


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
 Frame = -3

Query: 272 IVSKRAAQTALVMT----WRLTWRFCWLLAPEAAGMVNEF 165
           +V+ R   T L  T    + L W FC +++ +    +N+F
Sbjct: 374 LVAIRLLNTKLQFTAKDFFNLDWTFCHMVSHKWLNYINQF 413


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 370 LPPLPMVRGPPESPLQVL 317
           +PPL    GPP  P  V+
Sbjct: 114 VPPLTPSPGPPSHPYTVI 131


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +2

Query: 56  RWLVFIITEKKNK*LMLSFC 115
           RW+V     K ++ +++ FC
Sbjct: 166 RWIVLYTLSKMSQVMLIQFC 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,198
Number of Sequences: 336
Number of extensions: 3301
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)