Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0526
         (682 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0306 + 2499350-2499678,2500041-2500137                           31   0.84 
07_03_0248 + 15798650-15799075,15799143-15799619,15799713-15800948     30   2.0  
10_01_0164 + 1863890-1866253                                           28   7.9  

>01_01_0306 + 2499350-2499678,2500041-2500137
          Length = 141

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 580 TLAKPAGWPLWQP*ADPNDVIPI 512
           TL +   WP+WQP  D N ++P+
Sbjct: 119 TLGELMDWPIWQPSQDLNSILPV 141


>07_03_0248 + 15798650-15799075,15799143-15799619,15799713-15800948
          Length = 712

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -3

Query: 272 IVSKRAAQTALVMTWRLTWRFCWLLAPEAAGMVNEFYQHSLMAPSSRGV 126
           ++++ A QT LV+ W +T   CWL +    G   +  +   MA SS G+
Sbjct: 129 MMAQHAVQTVLVLWWTITLSVCWLYSIVKMG---QRIKAMRMASSSHGL 174


>10_01_0164 + 1863890-1866253
          Length = 787

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 227 SRSLPTPSAPHVWKQCDHCLH 289
           + S+P P A HVWK+    LH
Sbjct: 586 TNSIPVPLASHVWKEFSWTLH 606


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,648,207
Number of Sequences: 37544
Number of extensions: 389364
Number of successful extensions: 1334
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)