Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0526
(682 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.013
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.053
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.16
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 33 0.21
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 33 0.21
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 33 0.28
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 32 0.49
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.65
SB_31789| Best HMM Match : Ion_trans (HMM E-Value=6.3e-37) 31 0.86
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.5
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 30 2.0
SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.0
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 29 2.6
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 29 2.6
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 29 2.6
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.5
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.5
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 29 3.5
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.5
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.6
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 29 4.6
SB_52167| Best HMM Match : Extensin_2 (HMM E-Value=3.6) 28 6.1
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 28 6.1
SB_2154| Best HMM Match : LRR_1 (HMM E-Value=4.9e-06) 28 6.1
SB_8318| Best HMM Match : OTU (HMM E-Value=7.4e-19) 28 6.1
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 28 8.0
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 28 8.0
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 285 STLCVDGSNGRSTCSGDSGGPLTIGSGGS 371
+T+ G +G S CSGDSGGPL GG+
Sbjct: 481 TTMICAGGSGSSACSGDSGGPLVCHEGGT 509
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 35.1 bits (77), Expect = 0.053
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 291 LCVDGSNGRSTCSGDSGGPLTIGSGG 368
+CV G+ G S C+GDSGGPL GG
Sbjct: 110 MCVGGA-GSSACNGDSGGPLVCEEGG 134
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +3
Query: 252 RRTFGNNVIIASTLCVDGSNGRSTCSGDSGGPL 350
R T G V S +C G+ G S C+GDSGGPL
Sbjct: 446 RSTNGATVDENSMICAGGA-GSSACNGDSGGPL 477
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3
Query: 282 ASTLCVDGSNGRSTCSGDSGGPLTIGSGG 368
AS +C G GR C GDSGGPL G
Sbjct: 573 ASMVCAGGP-GRGGCQGDSGGPLVCNEAG 600
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3
Query: 282 ASTLCVDGSNGRSTCSGDSGGPLTIGSGG 368
AS +C G GR C GDSGGPL G
Sbjct: 113 ASMVCAGGP-GRGGCQGDSGGPLVCNEAG 140
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 285 STLCVDGSNGRSTCSGDSGGPLTIGSGG 368
S +C G C GDSGGP GG
Sbjct: 135 SMICAGGQRAAGGCQGDSGGPFVCNEGG 162
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 252 RRTFGNNVIIAS-TLCVDGSNGRSTCSGDSGGPLTIGSGG 368
+RT G V + S ++ G G+ C GDSGGP GG
Sbjct: 187 QRTNGRLVPVDSRSMICAGGQGKGGCQGDSGGPFVCEEGG 226
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +3
Query: 252 RRTFGNNVIIASTLCVDGS--NGRSTCSGDSGGPLTIGSGGSRQLVSTV 392
+R +G+ + + LC + N C GDSGGPL G L V
Sbjct: 101 KRKYGSGIYSYTHLCAGEAKPNAAGACQGDSGGPLVCERNGQWTLYGVV 149
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 252 RRTFGNNVIIASTLCV--DGSNGRSTCSGDSGGPLTIGSGG 368
+R +G + S +CV + N S+C GDSGGPL G
Sbjct: 478 KRAYGAIIRPYSHICVGFNTENAASSCQGDSGGPLVCEEEG 518
>SB_31789| Best HMM Match : Ion_trans (HMM E-Value=6.3e-37)
Length = 583
Score = 31.1 bits (67), Expect = 0.86
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +3
Query: 126 DSATRRRHERVLIKFIDHSSCFGSQQPTKTPSEPPGHYQRRLRRTFGNNVIIASTLCVDG 305
+++T H R + I+ S GS P P + P H R T N I C+
Sbjct: 478 ETSTSGVHPRHGQEDIEMSYVTGSHSPVHRPRQSPKHAPN--RATINANNICDPPRCLGT 535
Query: 306 SNGRST--CSGDSG 341
SNG + C GD G
Sbjct: 536 SNGSAMAGCHGDEG 549
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 31.1 bits (67), Expect = 0.86
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 273 VIIASTLCVDGSNGRSTCSGDSGGPLTIGSGG 368
V+ S +C G+ G S C GDSGGPL G
Sbjct: 128 VLDKSMVCAGGA-GSSICHGDSGGPLQCEENG 158
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 285 STLCVDGSNGRSTCSGDSGGPLTIGSGG 368
S +C G G C GDSGGP GG
Sbjct: 242 SMICAGGM-GMGGCQGDSGGPFVCNEGG 268
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 192 GSQQPTKTPSEPPGHYQRRLRRTFGNNVIIASTLCVDGSNGR-STCSGDSGGPLTIGSG 365
GSQ + P + R++ I A +C G TC GDSGGPL G
Sbjct: 768 GSQPEALNQAVVPLRTRSECERSYPGK-ISADMICAGNPEGGVDTCQGDSGGPLVCQHG 825
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +3
Query: 255 RTFGNNVIIASTLCV-DGSNGRSTCSGDSGG 344
R+ +N T C DG G TC GDSGG
Sbjct: 263 RSTRHNFNATVTFCAGDGKGGNDTCHGDSGG 293
>SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +3
Query: 249 LRRTFGNNVIIASTLCV---DGSNGRSTCSGDSGGPLTIGSG 365
LR + NV S LC D S C GDSGGPL +G
Sbjct: 275 LRNSHKQNVGWKSMLCAGYNDNKTQTSGCIGDSGGPLMCKAG 316
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +3
Query: 267 NNVIIASTLCVDGSNG-RSTCSGDSGGPLTIGSGGSRQLVSTV 392
N I + LC G + +C DSGGPL GG V V
Sbjct: 200 NGTIHETALCAGYERGLKDSCEFDSGGPLACQKGGRYYAVGLV 242
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 315 RSTCSGDSGGPLTIGSGG 368
++ CSGDSGGPL GG
Sbjct: 477 KAVCSGDSGGPLVCERGG 494
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 279 IASTLCVDGSNGRSTCSGDSGGPLTIGSGGSRQLV 383
++ST+ G TC GDSGGPL + LV
Sbjct: 384 VSSTMLCAQVPGIDTCQGDSGGPLVCENNNKWTLV 418
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 270 NVIIASTLCVD-GSNGRSTCSGDSGGPLTIGSGG 368
N I S +C G C GDSGGP+ +GG
Sbjct: 63 NKIHDSMICAGIDKGGIDACQGDSGGPMVCENGG 96
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 315 RSTCSGDSGGPLTIGSGG 368
++ CSGDSGGPL GG
Sbjct: 726 KAVCSGDSGGPLVCERGG 743
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +3
Query: 285 STLCVD-GSNGRSTCSGDSGGPLTIGSGG 368
S LC G TC GDSGGP+ S G
Sbjct: 867 SMLCAGLDQGGIDTCQGDSGGPMVCESRG 895
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 312 GRSTCSGDSGGPLTIGSGGSRQLVSTV 392
GR +C GDSGGPL + + ++ V
Sbjct: 172 GRDSCGGDSGGPLVCSNADGQYVLRGV 198
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +3
Query: 192 GSQQPTKTPSEPPGHYQRRLRRTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTIGSGG 368
G QP K + T N I S LC + G C GDSGGPL G
Sbjct: 87 GGNQPNKLMQASVPLVSQSKCNTAYPNKIHDSMLCAGLDAGGIDACQGDSGGPLVCEYNG 146
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 303 GSNGRSTCSGDSGGPLTIGSGGSRQLVSTV 392
G+ G C GDSGGPL G L+ +
Sbjct: 286 GAGGIDACQGDSGGPLVCKEGDVWYLMGAI 315
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 367 PPLPMVRGPPESPLQVLRPLEPSTQRVEAMIT 272
PPLP PP P+Q RP P+T +A T
Sbjct: 920 PPLP----PPPPPIQTTRPTVPTTPTTQASTT 947
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 252 RRTFGNNVIIASTLCVDG--SNGRSTCSGDSGGPLTIGSGGS 371
RR +G+ V + LC S+ C+GDSGGPL GS
Sbjct: 592 RRKYGD-VSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGS 632
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 252 RRTFGNNVIIASTLCVDG--SNGRSTCSGDSGGPLTIGSGGS 371
RR +G+ V + LC S+ C+GDSGGPL GS
Sbjct: 922 RRKYGD-VSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGS 962
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +3
Query: 192 GSQQPTKTPSEPPGHYQRRLRRTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPL 350
G QP K + T N I S LC + G C GDSGGPL
Sbjct: 431 GGNQPNKLMQASVPLVSQSKCNTAYPNKIHDSMLCAGLDAGGIDACQGDSGGPL 484
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 240 QRRLRRTFGNNVIIASTLCVDGSNG--RSTCSGDSGGPLTIGSGG 368
QR + N I + + G G + TC GDSGGPL S G
Sbjct: 1940 QRACEEQYRNLKPITARMRCAGIYGTPKGTCKGDSGGPLVCESKG 1984
>SB_52167| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
Length = 287
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 191 REPTTNKNAK*ASRSLPTPSAPHVWKQCDHCLHPL 295
R+PT N + + S P PHV Q H HP+
Sbjct: 175 RQPTLNSSPSPPTGSGPLTGNPHVTTQLSHGSHPV 209
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 243 RRLRRTFGNNVIIASTLCVD--GSNGRSTCSGDSGGP 347
+ +R G + + LC G G++ C+GDSGGP
Sbjct: 195 KNMRLENGTWRVTETMLCAGDAGKTGKNGCNGDSGGP 231
>SB_2154| Best HMM Match : LRR_1 (HMM E-Value=4.9e-06)
Length = 150
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 553 EATLPASPESHSLTPGSRAWN 615
E+T+ +PES P SRAWN
Sbjct: 111 ESTMDKNPESKGRNPESRAWN 131
>SB_8318| Best HMM Match : OTU (HMM E-Value=7.4e-19)
Length = 728
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 514 SVSHRSDQLKVAREATLPASPESHSLTPGSRAWNLNLTNDQ 636
SVSH+ + RE T+ + PE S++ N N T Q
Sbjct: 658 SVSHQQSSNNIDRENTISSRPEKRKQASTSKSSNSNETKKQ 698
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 252 RRTFGNNVIIASTLCV--DGSNGRSTCSGDSGGPLTI 356
R+ + ++ A+ C + S+ C GDSGGP ++
Sbjct: 280 RKAHPDYIVTANMFCAGFENSSRGDACQGDSGGPFSV 316
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +3
Query: 285 STLCVD-GSNGRSTCSGDSGGPLTIGSGGSRQLVSTV 392
S +C S G +C GDSGGP+ G L V
Sbjct: 38 SMVCAGRASGGIDSCQGDSGGPMVCEYNGKFNLEGVV 74
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,457,831
Number of Sequences: 59808
Number of extensions: 405600
Number of successful extensions: 1225
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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