Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0526
         (682 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    32   0.44 
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    27   9.4  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +3

Query: 279 IASTLCVDGSNGR-STCSGDSGGPLTIGSGGSRQLVSTV 392
           + S LC   S G+  +C GDSGGPL     G  +L   V
Sbjct: 221 LPSMLCAGYSYGKIDSCQGDSGGPLMCARDGHWELTGVV 259


>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical protein
            C11E4.6 protein.
          Length = 1170

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 35   CRLRKDLRWLVFIITEKKNK*LMLSFCIL 121
            C+ RKDL +  F+  + +N+    +FC+L
Sbjct: 1094 CQDRKDLNFFCFVARDTENRFFCHTFCVL 1122


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +3

Query: 288 TLCVDGSNGRSTCSGDSGGPLTI-GSGGSRQLVSTV 392
           + C      ++ CSGDSGG LT   S  +R+ +  +
Sbjct: 258 SFCTAEEEDKNVCSGDSGGGLTFHQSDSAREFIIAI 293


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,412,450
Number of Sequences: 27780
Number of extensions: 317769
Number of successful extensions: 1024
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)