BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0526
(682 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 26 0.38
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 25 0.88
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 25 0.88
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 25 0.88
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 24 1.5
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 2.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 3.6
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 4.7
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 22 4.7
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 4.7
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 4.7
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 22 6.2
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 6.2
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 25.8 bits (54), Expect = 0.38
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 261 FGNNVIIASTLCVDGSNGRSTCSGDSGGPLTIGSGGSRQLVS 386
+GN I+ + +C + G+ C DSGGP+ + +++LV+
Sbjct: 327 YGN--IMVNAMCAY-AKGKDACQMDSGGPVLWQNPRTKRLVN 365
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 24.6 bits (51), Expect = 0.88
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 229 GGSLGVFVGCWLP 191
G +GVFV CWLP
Sbjct: 330 GVIMGVFVVCWLP 342
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 24.6 bits (51), Expect = 0.88
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 229 GGSLGVFVGCWLP 191
G +GVFV CWLP
Sbjct: 330 GVIMGVFVVCWLP 342
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 24.6 bits (51), Expect = 0.88
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 229 GGSLGVFVGCWLP 191
G +GVFV CWLP
Sbjct: 330 GVIMGVFVVCWLP 342
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -1
Query: 220 LGVFVGCWLPKQLE--WSMNFISTLSWR 143
+GVF+ CWLP + WS F S W+
Sbjct: 341 MGVFIICWLPFFVVNLWS-GFCSQCIWQ 367
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 23.4 bits (48), Expect = 2.0
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1
Query: 220 LGVFVGCWLP 191
LGVF+ CWLP
Sbjct: 625 LGVFLICWLP 634
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 3.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 538 LKVAREATLPASPESHSLTPGSRAWNLNLTNDQM 639
L VA++ P P+S + GS LNL+ M
Sbjct: 344 LHVAKQMASPEPPKSSESSTGSSIPKLNLSTALM 377
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 195 SQQPTKTPSEPPGHYQRRLRRTFGN 269
S+ P + P E HY+R R + N
Sbjct: 121 SRYPLRPPQEVISHYRRTRRDRYTN 145
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 22.2 bits (45), Expect = 4.7
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 220 LGVFVGCWLP 191
+G FV CWLP
Sbjct: 312 VGGFVACWLP 321
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.7
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 13 LLVLGPGLPASEGPPMVSIYH 75
L+ + LP +E P++S+Y+
Sbjct: 259 LMTIRESLPPTEKTPLISLYY 279
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.2 bits (45), Expect = 4.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 129 SQRRIQNESINYLFFFSVMINTNHRRSFRSRQP 31
+QRRIQ+ +N S+ ++T R + R P
Sbjct: 884 AQRRIQSNGLNDPTTVSLAVDTVARSNVTPRSP 916
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 229 GGSLGVFVGCWLP 191
G +GVF+ CW+P
Sbjct: 275 GVIMGVFLICWVP 287
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 194 EPTTNKNAK*ASRS 235
EP TNKN K SRS
Sbjct: 239 EPGTNKNGKFFSRS 252
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,358
Number of Sequences: 438
Number of extensions: 3874
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -