Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0525
         (640 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058687-1|AAL13916.1|  219|Drosophila melanogaster LD40766p pro...   136   2e-32
AE014297-4427|AAF56929.1|  219|Drosophila melanogaster CG1969-PA...   136   2e-32
AE014297-4426|AAN14182.1|  215|Drosophila melanogaster CG1969-PB...   136   2e-32
AY058375-1|AAL13604.1|  897|Drosophila melanogaster GH14288p pro...    30   3.0  
AE013599-1191|AAF58736.3|  897|Drosophila melanogaster CG11919-P...    30   3.0  

>AY058687-1|AAL13916.1|  219|Drosophila melanogaster LD40766p
           protein.
          Length = 219

 Score =  136 bits (329), Expect = 2e-32
 Identities = 70/125 (56%), Positives = 89/125 (71%)
 Frame = +3

Query: 261 SDYDKGFLQLLSQLTSVGNITRKQYDDRFTKMKHSGGYYVTVIEDTRINKLIGAATLTIE 440
           +DYD+GFLQLLSQLT VGN+ R Q+  RF++MK SG Y+VTVIEDTR N++IGAA+L IE
Sbjct: 50  TDYDRGFLQLLSQLTHVGNVNRTQFLTRFSQMKASGDYFVTVIEDTRKNEIIGAASLVIE 109

Query: 441 QKFIHNCSLRGRLEDVVVNDTYRESNLVN*LW*PYRFSLKSWDAIKCLSTVRVKLIKFLL 620
           +KFIHNC++RGRLEDVVVNDTYR   L   +        +     K     + KLIKF  
Sbjct: 110 RKFIHNCAVRGRLEDVVVNDTYRGKQLGKLIVVTVSLLAEELGCYKMSLDCKDKLIKF-Y 168

Query: 621 DALGF 635
           ++LG+
Sbjct: 169 ESLGY 173



 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 24/38 (63%), Positives = 28/38 (73%)
 Frame = +1

Query: 139 YLYPPEILKRLDFSKSPAKFHPKISAVDPGEDWMIVRP 252
           YLY P +L +LDF +SPA F P ISA +PGE WM VRP
Sbjct: 9   YLYDPNLLLKLDFHRSPANFKPFISAANPGEPWMKVRP 46


>AE014297-4427|AAF56929.1|  219|Drosophila melanogaster CG1969-PA,
           isoform A protein.
          Length = 219

 Score =  136 bits (329), Expect = 2e-32
 Identities = 70/125 (56%), Positives = 89/125 (71%)
 Frame = +3

Query: 261 SDYDKGFLQLLSQLTSVGNITRKQYDDRFTKMKHSGGYYVTVIEDTRINKLIGAATLTIE 440
           +DYD+GFLQLLSQLT VGN+ R Q+  RF++MK SG Y+VTVIEDTR N++IGAA+L IE
Sbjct: 50  TDYDRGFLQLLSQLTHVGNVNRTQFLTRFSQMKASGDYFVTVIEDTRKNEIIGAASLVIE 109

Query: 441 QKFIHNCSLRGRLEDVVVNDTYRESNLVN*LW*PYRFSLKSWDAIKCLSTVRVKLIKFLL 620
           +KFIHNC++RGRLEDVVVNDTYR   L   +        +     K     + KLIKF  
Sbjct: 110 RKFIHNCAVRGRLEDVVVNDTYRGKQLGKLIVVTVSLLAEELGCYKMSLDCKDKLIKF-Y 168

Query: 621 DALGF 635
           ++LG+
Sbjct: 169 ESLGY 173



 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 24/38 (63%), Positives = 28/38 (73%)
 Frame = +1

Query: 139 YLYPPEILKRLDFSKSPAKFHPKISAVDPGEDWMIVRP 252
           YLY P +L +LDF +SPA F P ISA +PGE WM VRP
Sbjct: 9   YLYDPNLLLKLDFHRSPANFKPFISAANPGEPWMKVRP 46


>AE014297-4426|AAN14182.1|  215|Drosophila melanogaster CG1969-PB,
           isoform B protein.
          Length = 215

 Score =  136 bits (329), Expect = 2e-32
 Identities = 70/125 (56%), Positives = 89/125 (71%)
 Frame = +3

Query: 261 SDYDKGFLQLLSQLTSVGNITRKQYDDRFTKMKHSGGYYVTVIEDTRINKLIGAATLTIE 440
           +DYD+GFLQLLSQLT VGN+ R Q+  RF++MK SG Y+VTVIEDTR N++IGAA+L IE
Sbjct: 46  TDYDRGFLQLLSQLTHVGNVNRTQFLTRFSQMKASGDYFVTVIEDTRKNEIIGAASLVIE 105

Query: 441 QKFIHNCSLRGRLEDVVVNDTYRESNLVN*LW*PYRFSLKSWDAIKCLSTVRVKLIKFLL 620
           +KFIHNC++RGRLEDVVVNDTYR   L   +        +     K     + KLIKF  
Sbjct: 106 RKFIHNCAVRGRLEDVVVNDTYRGKQLGKLIVVTVSLLAEELGCYKMSLDCKDKLIKF-Y 164

Query: 621 DALGF 635
           ++LG+
Sbjct: 165 ESLGY 169



 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 24/38 (63%), Positives = 28/38 (73%)
 Frame = +1

Query: 139 YLYPPEILKRLDFSKSPAKFHPKISAVDPGEDWMIVRP 252
           YLY P +L +LDF +SPA F P ISA +PGE WM VRP
Sbjct: 5   YLYDPNLLLKLDFHRSPANFKPFISAANPGEPWMKVRP 42


>AY058375-1|AAL13604.1|  897|Drosophila melanogaster GH14288p
           protein.
          Length = 897

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = +1

Query: 109 NGNAEGKLSEYLYPPE--ILKRLDFSKSPAKFHPKISAVD 222
           +G+  G +SE    PE  I++  DF+KS  KF P ISA D
Sbjct: 845 DGHLSGTISEKELVPENVIVQEEDFTKSFNKFVPSISAKD 884


>AE013599-1191|AAF58736.3|  897|Drosophila melanogaster CG11919-PA,
           isoform A protein.
          Length = 897

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = +1

Query: 109 NGNAEGKLSEYLYPPE--ILKRLDFSKSPAKFHPKISAVD 222
           +G+  G +SE    PE  I++  DF+KS  KF P ISA D
Sbjct: 845 DGHLSGTISEKELVPENVIVQEEDFTKSFNKFVPSISAKD 884


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,179,131
Number of Sequences: 53049
Number of extensions: 506322
Number of successful extensions: 1118
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)