Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0525
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81130-8|CAB03416.1| 347|Caenorhabditis elegans Hypothetical pr... 100 1e-21
AY455927-3|AAR26304.1| 347|Caenorhabditis elegans phosphoglucos... 100 1e-21
Z71178-10|CAA94884.1| 165|Caenorhabditis elegans Hypothetical p... 88 6e-18
AB017628-1|BAA36497.1| 165|Caenorhabditis elegans acetyltransfe... 88 6e-18
AF098997-3|AAC68713.1| 348|Caenorhabditis elegans Serpentine re... 30 1.2
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 29 2.8
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 29 2.8
Z82086-8|CAN99701.1| 309|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory car... 28 4.9
AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synapt... 28 4.9
Z29117-13|CAA82377.2| 435|Caenorhabditis elegans Hypothetical p... 28 6.5
AF038619-1|AAB92076.2| 468|Caenorhabditis elegans Hypothetical ... 28 6.5
>Z81130-8|CAB03416.1| 347|Caenorhabditis elegans Hypothetical
protein T23G11.2 protein.
Length = 347
Score = 100 bits (239), Expect = 1e-21
Identities = 46/88 (52%), Positives = 64/88 (72%)
Frame = +3
Query: 258 RSDYDKGFLQLLSQLTSVGNITRKQYDDRFTKMKHSGGYYVTVIEDTRINKLIGAATLTI 437
RSD D +L+LL QLTSVG +T+ ++ RF+ MK+S Y++ V+ED +K++GAATL +
Sbjct: 204 RSD-DMNYLKLLEQLTSVGYVTKNDFEQRFSTMKNSESYFIVVLEDVNSSKIVGAATLVV 262
Query: 438 EQKFIHNCSLRGRLEDVVVNDTYRESNL 521
E K+IH C LRGR+EDVVV+ T R L
Sbjct: 263 ELKYIHECGLRGRVEDVVVDLTMRGKRL 290
Score = 83.4 bits (197), Expect = 1e-16
Identities = 43/88 (48%), Positives = 58/88 (65%)
Frame = +3
Query: 258 RSDYDKGFLQLLSQLTSVGNITRKQYDDRFTKMKHSGGYYVTVIEDTRINKLIGAATLTI 437
R+D D G+L+LL QLTSVG I + + +F MK + YY+ V+E +K+IGAATL I
Sbjct: 28 RND-DFGYLELLKQLTSVGFINQLVFRKQFDAMKKAKSYYIVVLEHIESSKIIGAATLLI 86
Query: 438 EQKFIHNCSLRGRLEDVVVNDTYRESNL 521
E K+IH RGR+EDVVV++ R L
Sbjct: 87 EFKYIHEAGTRGRVEDVVVDEKMRGKKL 114
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +2
Query: 503 LQGKQLGKLIVVTVSLLAQELGCYKMSLDC 592
++GK+LG LI + +A+ LG YK+SL+C
Sbjct: 285 MRGKRLGILINEALVKMARSLGVYKLSLEC 314
Score = 31.1 bits (67), Expect = 0.70
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 503 LQGKQLGKLIVVTVSLLAQELGCYKMSLDC 592
++GK+LG L+ + +A+ +G YK+SL+C
Sbjct: 109 MRGKKLGALLNEVLVEMAKTIGVYKLSLEC 138
>AY455927-3|AAR26304.1| 347|Caenorhabditis elegans
phosphoglucosamine acetyltransferaseprotein.
Length = 347
Score = 100 bits (239), Expect = 1e-21
Identities = 46/88 (52%), Positives = 64/88 (72%)
Frame = +3
Query: 258 RSDYDKGFLQLLSQLTSVGNITRKQYDDRFTKMKHSGGYYVTVIEDTRINKLIGAATLTI 437
RSD D +L+LL QLTSVG +T+ ++ RF+ MK+S Y++ V+ED +K++GAATL +
Sbjct: 204 RSD-DMNYLKLLEQLTSVGYVTKNDFEQRFSTMKNSESYFIVVLEDVNSSKIVGAATLVV 262
Query: 438 EQKFIHNCSLRGRLEDVVVNDTYRESNL 521
E K+IH C LRGR+EDVVV+ T R L
Sbjct: 263 ELKYIHECGLRGRVEDVVVDLTMRGKRL 290
Score = 83.4 bits (197), Expect = 1e-16
Identities = 43/88 (48%), Positives = 58/88 (65%)
Frame = +3
Query: 258 RSDYDKGFLQLLSQLTSVGNITRKQYDDRFTKMKHSGGYYVTVIEDTRINKLIGAATLTI 437
R+D D G+L+LL QLTSVG I + + +F MK + YY+ V+E +K+IGAATL I
Sbjct: 28 RND-DFGYLELLKQLTSVGFINQLVFRKQFDAMKKAKSYYIVVLEHIESSKIIGAATLLI 86
Query: 438 EQKFIHNCSLRGRLEDVVVNDTYRESNL 521
E K+IH RGR+EDVVV++ R L
Sbjct: 87 EFKYIHEAGTRGRVEDVVVDEKMRGKKL 114
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +2
Query: 503 LQGKQLGKLIVVTVSLLAQELGCYKMSLDC 592
++GK+LG LI + +A+ LG YK+SL+C
Sbjct: 285 MRGKRLGILINEALVKMARSLGVYKLSLEC 314
Score = 31.1 bits (67), Expect = 0.70
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 503 LQGKQLGKLIVVTVSLLAQELGCYKMSLDC 592
++GK+LG L+ + +A+ +G YK+SL+C
Sbjct: 109 MRGKKLGALLNEVLVEMAKTIGVYKLSLEC 138
>Z71178-10|CAA94884.1| 165|Caenorhabditis elegans Hypothetical
protein B0024.12 protein.
Length = 165
Score = 87.8 bits (208), Expect = 6e-18
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +3
Query: 258 RSDYDKGFLQLLSQLTSVGNITRKQYDDRFTKMKHS-GGYYVTVIEDTRINKLIGAATLT 434
+ D+ KG++ LLSQLTSVGN+ ++ ++ RF M+ S Y++ VIED+ K++ +A+L
Sbjct: 29 KDDFSKGYVDLLSQLTSVGNLDQEAFEKRFEAMRTSVPNYHIVVIEDSNSQKVVASASLV 88
Query: 435 IEQKFIHNCSLRGRLEDVVVNDTYRESNL 521
+E KFIH RGR+EDVVV+ R L
Sbjct: 89 VEMKFIHGAGSRGRVEDVVVDTEMRRQKL 117
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +2
Query: 503 LQGKQLGKLIVVTVSLLAQELGCYKMSLDC 592
++ ++LG +++ T+ L + LG YK+SL+C
Sbjct: 112 MRRQKLGAVLLKTLVSLGKSLGVYKISLEC 141
>AB017628-1|BAA36497.1| 165|Caenorhabditis elegans
acetyltransferase protein.
Length = 165
Score = 87.8 bits (208), Expect = 6e-18
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +3
Query: 258 RSDYDKGFLQLLSQLTSVGNITRKQYDDRFTKMKHS-GGYYVTVIEDTRINKLIGAATLT 434
+ D+ KG++ LLSQLTSVGN+ ++ ++ RF M+ S Y++ VIED+ K++ +A+L
Sbjct: 29 KDDFSKGYVDLLSQLTSVGNLDQEAFEKRFEAMRTSVPNYHIVVIEDSNSQKVVASASLV 88
Query: 435 IEQKFIHNCSLRGRLEDVVVNDTYRESNL 521
+E KFIH RGR+EDVVV+ R L
Sbjct: 89 VEMKFIHGAGSRGRVEDVVVDTEMRRQKL 117
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +2
Query: 503 LQGKQLGKLIVVTVSLLAQELGCYKMSLDC 592
++ ++LG +++ T+ L + LG YK+SL+C
Sbjct: 112 MRRQKLGAVLLKTLVSLGKSLGVYKISLEC 141
>AF098997-3|AAC68713.1| 348|Caenorhabditis elegans Serpentine
receptor, class h protein71 protein.
Length = 348
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -1
Query: 172 PVFLISPEGKGIRRVSLPHFRSFPCPFCGFFL 77
P+FL PE RR+ L S PCP GFFL
Sbjct: 169 PIFLNLPEQNRARRIVL---ESHPCPTKGFFL 197
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 312 GNITRKQYDDRFTKMKHSGGYYVTVIEDTRINKLIGAATLTIEQKFIHNCSLRGRLEDV 488
GNI++ Q++++F H V + INK++G +E+KF + R RL V
Sbjct: 207 GNISKYQWNEKFQYFDHVRTLDVETLASGSINKMLG----IVEEKFSTAFAARMRLIQV 261
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 312 GNITRKQYDDRFTKMKHSGGYYVTVIEDTRINKLIGAATLTIEQKFIHNCSLRGRLEDV 488
GNI++ Q++++F H V + INK++G +E+KF + R RL V
Sbjct: 207 GNISKYQWNEKFQYFDHVRTLDVETLASGSINKMLG----IVEEKFSTAFAARMRLIQV 261
>Z82086-8|CAN99701.1| 309|Caenorhabditis elegans Hypothetical
protein ZK228.4b protein.
Length = 309
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 279 FLQLLSQLTSVGNITRKQYDDRFTKMKHSGGYYVTVI--EDTRINKLIGAATL 431
F QL+ + YD RF + G ++VTVI E N L+ +L
Sbjct: 12 FDQLIDLAAETNGWAHQAYDYRFYSTSYDGYWFVTVIDKEKEEFNNLVAGVSL 64
>AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory
carrier membrane protein protein.
Length = 335
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 454 WMNFCSMVSVAAPMSLLMRVSSITVT 377
W+N +V+ P++LLM +S+IT T
Sbjct: 245 WINALDTFNVSVPIALLMLISAITFT 270
>AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synaptic
vesicle protein)homolog protein 1 protein.
Length = 335
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 454 WMNFCSMVSVAAPMSLLMRVSSITVT 377
W+N +V+ P++LLM +S+IT T
Sbjct: 245 WINALDTFNVSVPIALLMLISAITFT 270
>Z29117-13|CAA82377.2| 435|Caenorhabditis elegans Hypothetical
protein C48B4.2 protein.
Length = 435
Score = 27.9 bits (59), Expect = 6.5
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 12/112 (10%)
Frame = -3
Query: 536 PQLIYQVAFPVSVINYDVF*T------AAQRAVVDE------FLFDGQRCCTYEFINARV 393
P Y V+F VS++ F AA R V E F + RC IN
Sbjct: 315 PSRFYTVSFWVSLVLSGFFIAICITLIAAPRTTVQEIIKNQSFKNNATRCSVQIGINCIS 374
Query: 392 LYYGHIVTARVFHLSETVIILFSRNISHAC*LTEELQETLIVIRALKGLTII 237
++ +FH+S + ++L S +S++ T LIV+ + G I+
Sbjct: 375 WTSNFLIFDHIFHVSYSHVLLISNAVSNSLYPTTSPPSILIVLCSSPGFPIL 426
>AF038619-1|AAB92076.2| 468|Caenorhabditis elegans Hypothetical
protein F56A11.4 protein.
Length = 468
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = -1
Query: 457 LWMNFC-SMVSVAAPMSLLMRVSSITVT 377
+WM +C S+ +V P SLL+ ++S+T+T
Sbjct: 254 IWMFWCRSIFNVFLPFSLLLILNSLTIT 281
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,606,423
Number of Sequences: 27780
Number of extensions: 269275
Number of successful extensions: 691
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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