Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0525
(640 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g15770.1 68418.m01844 GCN5-related N-acetyltransferase (GNAT)... 73 1e-13
At5g01620.2 68418.m00078 expressed protein several hypothetical ... 28 4.5
At5g01620.1 68418.m00077 expressed protein several hypothetical ... 28 4.5
At1g79150.1 68414.m09229 expressed protein ; expression supporte... 28 4.5
At1g10340.2 68414.m01165 ankyrin repeat family protein contains ... 28 6.0
At1g10340.1 68414.m01164 ankyrin repeat family protein contains ... 28 6.0
At3g61530.2 68416.m06892 ketopantoate hydroxymethyltransferase f... 27 7.9
At3g61530.1 68416.m06891 ketopantoate hydroxymethyltransferase f... 27 7.9
>At5g15770.1 68418.m01844 GCN5-related N-acetyltransferase (GNAT)
family protein similar to SP|O93806
Glucosamine-phosphate N-acetyltransferase (EC 2.3.1.4)
(Phosphoglucosamine transacetylase) (Phosphoglucosamine
acetylase) {Candida albicans}; contains Pfam profile
PF00583: acetyltransferase, GNAT family
Length = 149
Score = 73.3 bits (172), Expect = 1e-13
Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +3
Query: 261 SDYDKGFLQLLSQLTSVGNITRKQYDDRFTKMKHSGG-YYVTVIEDTRINKLIGAATLTI 437
SD KGF++LL QLT G++T +++D RF +++ G + + VIE+ K+ ++ I
Sbjct: 13 SDKRKGFIELLGQLTVTGSVTDEEFDRRFEEIRSYGDDHVICVIEEETSGKIAATGSVMI 72
Query: 438 EQKFIHNCSLRGRLEDVVVNDTYRESNL 521
E+KF+ NC G +EDVVV+ +R L
Sbjct: 73 EKKFLRNCGKAGHIEDVVVDSRFRGKQL 100
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 506 QGKQLGKLIVVTVSLLAQELGCYKMSLDC*GKINKIFTRRFGI 634
+GKQLGK +V + + +GCYK+ LDC NK+F + G+
Sbjct: 96 RGKQLGKKVVEFLMDHCKSMGCYKVILDC-SVENKVFYEKCGM 137
>At5g01620.2 68418.m00078 expressed protein several hypothetical
proteins - Arabidopsis thaliana
Length = 449
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 534 W*PYRFSLKSWDAIKCLSTVRVKLIKFLLDAL 629
W P+ +LK W+AI+ +R K + F+ D+L
Sbjct: 157 WQPHACNLKRWNAIEMWEKLRGKRLMFVGDSL 188
>At5g01620.1 68418.m00077 expressed protein several hypothetical
proteins - Arabidopsis thaliana
Length = 449
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 534 W*PYRFSLKSWDAIKCLSTVRVKLIKFLLDAL 629
W P+ +LK W+AI+ +R K + F+ D+L
Sbjct: 157 WQPHACNLKRWNAIEMWEKLRGKRLMFVGDSL 188
>At1g79150.1 68414.m09229 expressed protein ; expression supported
by MPSS
Length = 495
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 336 DDRFTKMKHSGGYYVTVIEDTRINKLIGAATLTIEQKFIHNCSLRGRLED 485
D ++ K +V+ I+ INK G +T+E K+ S R L++
Sbjct: 31 DLKYVKENTDYAQFVSQIDTAAINKQCGGRVMTVEDKYEEERSKRKTLQE 80
>At1g10340.2 68414.m01165 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 574
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +3
Query: 246 EAFQRSDYDKGFLQLLSQLTSVGNITRKQYDDRFTKMKHSGGYYVTVIEDTRINKLIGAA 425
EAFQ + +LLS+ G T ++ D +H G V VI R+ ++IG
Sbjct: 310 EAFQLLPREAQDFELLSRWLRFGTETSQELDSENNVEQHEGSQEVEVI---RLLRIIGIN 366
Query: 426 TLTIEQK 446
T I ++
Sbjct: 367 TSEIAER 373
>At1g10340.1 68414.m01164 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 578
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +3
Query: 246 EAFQRSDYDKGFLQLLSQLTSVGNITRKQYDDRFTKMKHSGGYYVTVIEDTRINKLIGAA 425
EAFQ + +LLS+ G T ++ D +H G V VI R+ ++IG
Sbjct: 314 EAFQLLPREAQDFELLSRWLRFGTETSQELDSENNVEQHEGSQEVEVI---RLLRIIGIN 370
Query: 426 TLTIEQK 446
T I ++
Sbjct: 371 TSEIAER 377
>At3g61530.2 68416.m06892 ketopantoate hydroxymethyltransferase
family protein similar to SP|Q9Y7B6
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC
2.1.2.11) (Ketopantoate hydroxymethyltransferase)
{Emericella nidulans}; contains Pfam profile PF02548:
Ketopantoate hydroxymethyltransferase
Length = 354
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 506 QGKQLGKLI-VVTVSLLAQELGCYKMSLDC 592
QGK + + VV ++ QE GC+ + L+C
Sbjct: 196 QGKNIASAVKVVETAMALQEAGCFSVVLEC 225
>At3g61530.1 68416.m06891 ketopantoate hydroxymethyltransferase
family protein similar to SP|Q9Y7B6
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC
2.1.2.11) (Ketopantoate hydroxymethyltransferase)
{Emericella nidulans}; contains Pfam profile PF02548:
Ketopantoate hydroxymethyltransferase
Length = 354
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 506 QGKQLGKLI-VVTVSLLAQELGCYKMSLDC 592
QGK + + VV ++ QE GC+ + L+C
Sbjct: 196 QGKNIASAVKVVETAMALQEAGCFSVVLEC 225
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,816,932
Number of Sequences: 28952
Number of extensions: 249669
Number of successful extensions: 675
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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