Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0523
         (595 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DC0C26 Cluster: zinc finger protein, multitype 1...    36   0.72 
UniRef50_Q17L45 Cluster: Laminin alpha-1, 2 chain; n=3; Culicida...    36   0.72 
UniRef50_Q125Z2 Cluster: Putative uncharacterized protein; n=1; ...    35   1.3  
UniRef50_Q4S226 Cluster: Chromosome undetermined SCAF14764, whol...    34   2.2  
UniRef50_UPI0000EBDF75 Cluster: PREDICTED: hypothetical protein;...    33   3.8  
UniRef50_A5KAC8 Cluster: DegP-like serine protease 1, putative; ...    33   5.0  
UniRef50_A3AHJ5 Cluster: Putative uncharacterized protein; n=1; ...    32   8.8  
UniRef50_Q4QA64 Cluster: Putative uncharacterized protein; n=3; ...    32   8.8  

>UniRef50_UPI0000DC0C26 Cluster: zinc finger protein, multitype 1;
           n=1; Rattus norvegicus|Rep: zinc finger protein,
           multitype 1 - Rattus norvegicus
          Length = 947

 Score = 35.9 bits (79), Expect = 0.72
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 217 IYSLPCSGPRPPAVTRCRVPTAASPTVEYDALAAPRVLACGTRP 348
           +Y LP +G  PPA     VP  +SPT E  +   P   + G  P
Sbjct: 751 LYELPAAGAPPPAAGPAPVPVVSSPTAELPSSPRPASASAGPAP 794


>UniRef50_Q17L45 Cluster: Laminin alpha-1, 2 chain; n=3;
            Culicidae|Rep: Laminin alpha-1, 2 chain - Aedes aegypti
            (Yellowfever mosquito)
          Length = 3138

 Score = 35.9 bits (79), Expect = 0.72
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = -3

Query: 380  YLNTKRCRQHGGRVPQASTRGAASASYSTVGDAAVGTRQRVTAGG 246
            YLN +R    G  VP  S  GA+SAS+ST+    +G   R+  GG
Sbjct: 2261 YLNVRRMTHSGVLVPTHSVEGASSASFSTI---TMGPSSRIWIGG 2302


>UniRef50_Q125Z2 Cluster: Putative uncharacterized protein; n=1;
           Polaromonas sp. JS666|Rep: Putative uncharacterized
           protein - Polaromonas sp. (strain JS666 / ATCC BAA-500)
          Length = 164

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 19/59 (32%), Positives = 26/59 (44%)
 Frame = +1

Query: 202 NLIYTIYSLPCSGPRPPAVTRCRVPTAASPTVEYDALAAPRVLACGTRPPCCRQRFVFR 378
           NL Y + S PC G +PP   +   P+ + P VE     +  V+A G   P     F  R
Sbjct: 22  NLAYALASGPCLGSKPPFAFKSDRPSGSKPIVERRRTGSGCVVATGPHHPVLEGMFPAR 80


>UniRef50_Q4S226 Cluster: Chromosome undetermined SCAF14764, whole
            genome shotgun sequence; n=5; Euteleostomi|Rep:
            Chromosome undetermined SCAF14764, whole genome shotgun
            sequence - Tetraodon nigroviridis (Green puffer)
          Length = 1724

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = -3

Query: 341  VPQASTRGAASASYSTVGDAAVGTRQRVTAGGRGPLHGKL 222
            V Q++ RG  S  Y   GD  + TRQ  T+G  GPL+ +L
Sbjct: 1176 VSQSNLRGVVSGVYQQGGDMLLDTRQLNTSGLAGPLYWRL 1215


>UniRef50_UPI0000EBDF75 Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 302

 Score = 33.5 bits (73), Expect = 3.8
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -3

Query: 368 KRCRQHGGRVPQASTRGAASASYSTVGDAAVGTRQRVTAGGRGP 237
           +  R HGGR    S RG A  + S+    A G+ +R T+ GR P
Sbjct: 218 RNLRAHGGRGRDGSERGGAPGNRSSRRRRAPGSGRRATSPGRAP 261


>UniRef50_A5KAC8 Cluster: DegP-like serine protease 1, putative;
           n=1; Plasmodium vivax|Rep: DegP-like serine protease 1,
           putative - Plasmodium vivax
          Length = 809

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -3

Query: 332 ASTRGAASASYSTVGDAAVGTRQRVTAGGRGPLHGK 225
           A++ GAAS+  +++G A+ G        GRGPL G+
Sbjct: 494 AASTGAASSGEASMGAASTGAASHAITAGRGPLPGR 529


>UniRef50_A3AHJ5 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 244

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = -3

Query: 317 AASASYSTVGDAAVGTRQRVTAGGRGPLHG 228
           A+ +S   VG AA G R+R   GG GPLHG
Sbjct: 138 ASCSSAGGVGIAAGGGRRRHAGGGGGPLHG 167


>UniRef50_Q4QA64 Cluster: Putative uncharacterized protein; n=3;
            Leishmania|Rep: Putative uncharacterized protein -
            Leishmania major
          Length = 1082

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 15/44 (34%), Positives = 17/44 (38%)
 Frame = +1

Query: 235  SGPRPPAVTRCRVPTAASPTVEYDALAAPRVLACGTRPPCCRQR 366
            + P  P  T C  P A  P   Y +   PR L    RPP    R
Sbjct: 926  TAPSLPEATACASPPAVRPPTSYPSETDPRALRRSPRPPSAHPR 969


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,672,593
Number of Sequences: 1657284
Number of extensions: 8311740
Number of successful extensions: 21923
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21913
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)