Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0523
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   1.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   3.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   5.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -2

Query: 426  NVQLANVVKLASTNYVSEHKALSTTWRPRPASKYP 322
            NV + ++V  A     +   + +T+W P   + YP
Sbjct: 1333 NVNVVDIVTTAKPAQSTTSVSTTTSWNPGSTTNYP 1367


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 220 YSLPCSGPRPPAVTRCRVPTAASPTVEYDALAA 318
           YS    GP  P+V+ C    ++S    Y A ++
Sbjct: 123 YSAAAPGPSDPSVSSCHQGFSSSTWCNYSAYSS 155


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -2

Query: 189 IISELFLNNIYLFTF*VF*CIY 124
           II   FLNN Y   F VF   Y
Sbjct: 288 IILTSFLNNFYFIIFQVFESFY 309


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 360 STTWRPRPASKYPRSGERVI 301
           S TW  RP ++ PR   R +
Sbjct: 279 SRTWPARPVNQVPRDLNREV 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,720
Number of Sequences: 336
Number of extensions: 2254
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)