Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0523
         (595 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    27   0.60 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.2  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   5.6  

>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 26.6 bits (56), Expect = 0.60
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 99  F*IITVYCQSDPGSEARGWSCGVDC 25
           F I  +Y  S PG+   GW+CGV C
Sbjct: 396 FQISDIYWCSPPGN---GWACGVSC 417



 Score = 26.6 bits (56), Expect = 0.60
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 120 KDSGIY*F*IITVYCQSDPGSEARGWSCGVDCVEVNN 10
           +D G+  F I  +Y  S PG   +GW CG+ C ++ +
Sbjct: 704 EDHGL--FQISDIYWCSPPG---KGWVCGLSCADLED 735



 Score = 25.8 bits (54), Expect = 1.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 81  YCQSDPGSEARGWSCGVDCVEVNN 10
           Y  S PG   RGW CG+ C ++ +
Sbjct: 560 YWCSPPG---RGWVCGISCAQLRD 580


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 63  GSEARGWSCGVDCVEVNNK 7
           GS   GWS  VDCV ++ +
Sbjct: 460 GSMGVGWSLQVDCVYIDRR 478


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 63  GSEARGWSCGVDCVEVNNK 7
           GS   GWS  VDCV ++ +
Sbjct: 461 GSMGVGWSLQVDCVYIDRR 479


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 9   YCSLLHNRHRTTSP 50
           YC LL+NR RT  P
Sbjct: 710 YCKLLYNRGRTYVP 723


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,423
Number of Sequences: 2352
Number of extensions: 9128
Number of successful extensions: 59
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)