Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0523
         (595 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF494106-1|AAM96012.1|  331|Homo sapiens mutant globoside syntha...    30   7.1  
AF494105-1|AAM96011.1|  331|Homo sapiens mutant globoside syntha...    30   7.1  

>AF494106-1|AAM96012.1|  331|Homo sapiens mutant globoside synthase
           protein.
          Length = 331

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
 Frame = +3

Query: 351 MLSTTLCVQIHSLYLLI*PRLLVEHYIHICVQTIS-------DTNLKFIYQIHIPSKPCK 509
           ++S  L  +I+ +   + P    + Y+ IC+  +        DTNL F+Y+IH+    C+
Sbjct: 244 IMSRDLVPRIYEMMGHVKPIKFADVYVGICLNLLKVNIHIPEDTNLFFLYRIHL--DVCQ 301

Query: 510 LRRL 521
           LRR+
Sbjct: 302 LRRV 305


>AF494105-1|AAM96011.1|  331|Homo sapiens mutant globoside synthase
           protein.
          Length = 331

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
 Frame = +3

Query: 351 MLSTTLCVQIHSLYLLI*PRLLVEHYIHICVQTIS-------DTNLKFIYQIHIPSKPCK 509
           ++S  L  +I+ +   + P    + Y+ IC+  +        DTNL F+Y+IH+    C+
Sbjct: 244 IMSRDLVPRIYEMMGHVKPIKFEDVYVRICLNLLKVNIHIPEDTNLFFLYRIHL--DVCQ 301

Query: 510 LRRL 521
           LRR+
Sbjct: 302 LRRV 305


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,039,994
Number of Sequences: 237096
Number of extensions: 1224096
Number of successful extensions: 2717
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2716
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)