Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0523
         (595 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical pr...    28   4.4  
U97196-7|AAB52462.1|  141|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical
           protein ZC518.2 protein.
          Length = 984

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 244 RPPAVTRCRVPTAASPTVEYDALAAPRVLACGTRPPCCRQR 366
           RP      + P A +PT  Y    APR  A    PP  +Q+
Sbjct: 160 RPAPFPAAQPPPAPTPTPSYQQQMAPRPQAPAAYPPASQQQ 200


>U97196-7|AAB52462.1|  141|Caenorhabditis elegans Hypothetical
           protein B0207.8 protein.
          Length = 141

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 143 KFFNAFTEKTQEFINFKLLQYTVNQ 69
           KF N F E T +F+NF+ +  + N+
Sbjct: 98  KFKNGFCENTMKFVNFQNINRSTNE 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,384,383
Number of Sequences: 27780
Number of extensions: 204006
Number of successful extensions: 451
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)