Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0522
         (475 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   2.2  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   6.7  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   6.7  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    21   6.7  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    21   6.7  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   8.9  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 36  TSNQ*TYSVLKRPEQIRETTSYITTKYKLYVASS 137
           TSN+ +Y    RP  +  T+       KLY ASS
Sbjct: 7   TSNEDSYLSAGRPSNLLRTSFSSAKLEKLYRASS 40


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 286 KCRNIEKQN*DNILIFF 336
           KC  I+KQN D +  +F
Sbjct: 77  KCTEIQKQNLDKLAEWF 93


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 286 KCRNIEKQN*DNILIFF 336
           KC  I+KQN D +  +F
Sbjct: 77  KCTEIQKQNLDKLAEWF 93


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 60  VLKRPEQIRETTSYITTKYKL 122
           V+KR E ++ T  Y+   YK+
Sbjct: 73  VMKRIEMLKGTELYVEPVYKM 93


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 60  VLKRPEQIRETTSYITTKYKL 122
           V+KR E ++ T  Y+   YK+
Sbjct: 73  VMKRIEMLKGTELYVEPVYKM 93


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 439 AARYSYTPVTNTLPPVFDPVFNY 371
           + RY+ +   N  P   DP+ NY
Sbjct: 147 SCRYTASLAGNVAPASADPMVNY 169


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,515
Number of Sequences: 438
Number of extensions: 2465
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)