Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0521
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 183 2e-47
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 94 2e-20
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 87 3e-18
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 74 2e-14
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 50 4e-07
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 46 6e-06
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 44 1e-05
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 32 0.083
SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyc... 31 0.11
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 30 0.25
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 28 1.0
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 27 1.8
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 27 2.3
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 27 3.1
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 3.1
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 4.1
SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces p... 26 5.4
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 5.4
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 5.4
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 25 7.2
SPCP1E11.04c |pal1||membrane associated protein Pal1 |Schizosacc... 25 9.5
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 9.5
SPBC1683.09c |frp1||ferric-chelate reductase Frp1|Schizosaccharo... 25 9.5
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 183 bits (446), Expect = 2e-47
Identities = 80/86 (93%), Positives = 83/86 (96%)
Frame = +1
Query: 256 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 435
GRPRH G+MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR
Sbjct: 36 GRPRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 95
Query: 436 VAPEEHPVLLTEAPLNPKANREKMTR 513
VAPEEHP LLTEAPLNPK+NREKMT+
Sbjct: 96 VAPEEHPCLLTEAPLNPKSNREKMTQ 121
Score = 95.1 bits (226), Expect = 8e-21
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = +3
Query: 483 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE 650
P+ + + QI+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYE
Sbjct: 112 PKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 167
Score = 70.1 bits (164), Expect = 3e-13
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = +2
Query: 155 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI 253
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSI
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSI 34
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 93.9 bits (223), Expect = 2e-20
Identities = 43/85 (50%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN-EL 432
GR +H+ VM QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + + + +L
Sbjct: 40 GRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQL 99
Query: 433 RVAPEEHPVLLTEAPLNPKANREKM 507
PEEHP+LLTE PL N+EK+
Sbjct: 100 NTLPEEHPLLLTEPPLANIRNKEKI 124
Score = 65.3 bits (152), Expect = 7e-12
Identities = 27/47 (57%), Positives = 38/47 (80%)
Frame = +3
Query: 510 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE 650
+ +ET N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+
Sbjct: 126 EYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYD 172
Score = 43.2 bits (97), Expect = 3e-05
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +2
Query: 173 LVVDNGSGMCKAGFAGDDAPRAVFPS 250
+ +DNGSG KAGFAGDD P+ +FP+
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPT 37
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 86.6 bits (205), Expect = 3e-18
Identities = 34/70 (48%), Positives = 54/70 (77%)
Frame = +1
Query: 298 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 477
KD VGDEA++ R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P
Sbjct: 50 KDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPP 109
Query: 478 LNPKANREKM 507
+NP ANREKM
Sbjct: 110 MNPVANREKM 119
Score = 67.7 bits (158), Expect = 1e-12
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = +3
Query: 483 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE 650
P + + + MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE
Sbjct: 112 PVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYE 167
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +2
Query: 161 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIGEGPAIRA 277
E A +V+DNG+G K G+A D+ PR FPSI P +RA
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRA 40
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 74.1 bits (174), Expect = 2e-14
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +1
Query: 301 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 477
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE P
Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132
Query: 478 LNPKANRE 501
LNP NRE
Sbjct: 133 LNPPENRE 140
Score = 54.8 bits (126), Expect = 1e-08
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 8/64 (12%)
Frame = +3
Query: 483 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTV 638
P + +IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H +
Sbjct: 135 PPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHII 194
Query: 639 PIYE 650
P+ E
Sbjct: 195 PVAE 198
Score = 39.5 bits (88), Expect = 4e-04
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2
Query: 173 LVVDNGSGMCKAGFAGDDAPRAVFPSI 253
+++DNG+G K G+AG+DAP VFP++
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTV 34
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 49.6 bits (113), Expect = 4e-07
Identities = 27/73 (36%), Positives = 37/73 (50%)
Frame = +1
Query: 343 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTRSCS 522
+ +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K T
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVK-TLETM 121
Query: 523 KHSTRPPCTSPSK 561
S R P T +K
Sbjct: 122 FESLRCPATYLAK 134
Score = 38.7 bits (86), Expect = 7e-04
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 158 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPS 250
+EV+A+V+D GS + GF+G+D P+ V PS
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPS 39
Score = 35.5 bits (78), Expect = 0.007
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 510 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE 650
+ MFE+ PA Y+A Q + +ASG+ T ++D G S IY+
Sbjct: 119 ETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYD 165
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 45.6 bits (103), Expect = 6e-06
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 289 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 465
+ + + VG++ + G ++ + P E +++NWD ME++ +TF +L + EHP+ +
Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120
Query: 466 TEAPLNPKANREKMT 510
TE NP R MT
Sbjct: 121 TEPLANPTYVRSTMT 135
Score = 37.9 bits (84), Expect = 0.001
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +3
Query: 510 QIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPI 644
+++FE +N P++ I + S Y + + ++GIVL+ G+ SH +P+
Sbjct: 136 ELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPV 182
Score = 31.5 bits (68), Expect = 0.11
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 173 LVVDNGSGMCKAGFAGDDAPRAVFPSI 253
LV+DNGS +AG+ G+ P+ VF ++
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNL 53
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 44.4 bits (100), Expect = 1e-05
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 PRHQGVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 435
P + GV + ++ YV DE Q I + +K +GI+ +W+ W +L+
Sbjct: 37 PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96
Query: 436 VAPEEHPVLLTEAPLNPKANREKM 507
V P E+ +++TE NP++ R+++
Sbjct: 97 VNPTEYAMMITEPSWNPQSVRQQI 120
Score = 37.5 bits (83), Expect = 0.002
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +3
Query: 483 PQGQQREDDQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE 650
PQ +++ + FE + PA Y+ QAV +A+ ++T +++D G + P+ +
Sbjct: 113 PQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVD 168
Score = 35.1 bits (77), Expect = 0.009
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 158 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPS 250
EE+ +LV+D GS + G+AG+++P + PS
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS 38
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 31.9 bits (69), Expect = 0.083
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 510 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE 650
Q FE P +A + ++ LYA G G+V+D G + PI +
Sbjct: 167 QFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILD 213
Score = 25.8 bits (54), Expect = 5.4
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1
Query: 358 PIEHGIVTNWDDMEKIWHHTF 420
PI+ G V +W+ ++ W H +
Sbjct: 113 PIQRGRVVDWEALKAFWKHLY 133
>SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 457
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 298 SVPYRPSRPDGGAFPDRGEHGARSIISCETGLAHT 194
SVPY PS+P+GGA+ G H R +++ L T
Sbjct: 87 SVPY-PSKPNGGAYQGIGFHYGRFVMNLRKALTST 120
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 30.3 bits (65), Expect = 0.25
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 421 YNELRVAPEEHPVLLTEAPLNPK-ANREKMTRSCSKHSTRPPCTSPSKPCSRCTRPVVPP 597
Y+EL +A +E P L P PK A++ K + K + S KP S+ TRP +P
Sbjct: 23 YSELPIAYQEIP--LQSLPPYPKVASKLKGVVAGGKENN---IASFQKPSSKATRPYIPS 77
Query: 598 VSCWTPATVSPTPCP 642
+ T +V P P P
Sbjct: 78 YTRLT-YSVPPLPIP 91
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 418 FYNELRVAPEEHPVLLTE--APLNPKANREKMTRSCSKHSTRP 540
+Y L E+HP+LLT+ A L P+ + ++ R K P
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTP 1441
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -3
Query: 324 CLISYIRVLLSHTDHHALMAGPS--PIEGNTARGASSPAKPALHIPEPLS 181
CL+ ++ L+ D L+ P PIE A +PA P P P S
Sbjct: 295 CLVKKLKRTLNIKDSDELLINPKRRPIEVKPAAPVPTPAPPVKTSPHPAS 344
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 27.1 bits (57), Expect = 2.3
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 390 IPVSDDSVFDGVFEGQDTSFALCLISYIRVL-LSHTDHHALMAGPSPIEGNTARGASSPA 214
+P + +V +TSFAL S L +S T A+ + P+ +E + +S+PA
Sbjct: 63 LPTQEAAVETNASASHETSFALPTTSPAASLSISPTKSAAVSSEPN-VEADVKSLSSTPA 121
Query: 213 KPALHIP 193
P L+ P
Sbjct: 122 APQLNSP 128
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 472 APLNPKANREKMTRSCSKHSTRPPCTSPSKP 564
+P++P ANR R S PP + KP
Sbjct: 146 SPISPSANRNDSKRQASSFRRSPPSSVHMKP 176
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +1
Query: 538 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP 642
PP P + T PV PV+ A P P P
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAP 401
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 325 VPHLLHKSPSVPYRPSRPDGGA 260
+ L+ K+PS PY SRP A
Sbjct: 306 IDQLISKAPSYPYSSSRPSASA 327
>SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 25.8 bits (54), Expect = 5.4
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 297 LSHTDHHALMAGPSPIEGNTARGASSPAKPALHIPEPLSTTNAATS 160
+SHT H + P+ + T A+SPA P+L P + ++S
Sbjct: 83 VSHTSHKSRRQYPAEVFELTNTLAASPAPPSLSEPSYVMARTPSSS 128
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 354 FEGQDTSFALCLISYIRVLLSHTDHHA 274
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 514 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS 627
SC+ ++ PP + + P + P VPP S TP T +
Sbjct: 392 SCTTSTSIPPTGNSTTPVT----PTVPPTSSSTPLTTT 425
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 25.4 bits (53), Expect = 7.2
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 285 DHHALMAGPSPIEGNTARGA--SSPAKPALHIPEPLSTTNAA 166
DH A +GP P N+A A ++ A A P P ++ N A
Sbjct: 54 DHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPAASQNRA 95
>SPCP1E11.04c |pal1||membrane associated protein Pal1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 263 GLPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQ 165
GL RS + L NRP YRSH + TR+
Sbjct: 307 GLNRSASMMSRTPNTL-NRPSNYRSHSSMGTRR 338
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = +1
Query: 463 LTEAPLNPKANREKMTRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP 642
L P PK E+ S S+ + +P +PS P +P PV P+ P P
Sbjct: 482 LNPPPAMPKVFPERDISSASQKAAQPSVITPSVP-----QPPAAPVVPEAPSVHQPPAAP 536
>SPBC1683.09c |frp1||ferric-chelate reductase
Frp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 564
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 277 VMVGMGQKDSYVGDEAQSKRGILTLKYPI 363
+M+G +Y+G AQ KR +LT + I
Sbjct: 165 IMIGAIHGFAYIGLAAQGKRALLTARVTI 193
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,854,536
Number of Sequences: 5004
Number of extensions: 63175
Number of successful extensions: 231
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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