Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0518
(455 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 40 0.001
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 36 0.012
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 36 0.020
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 32 0.19
07_01_0390 + 2931331-2932299 29 1.3
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 29 1.8
07_01_0616 + 4560866-4560952,4561144-4561208,4564481-4564913,456... 29 1.8
03_06_0317 + 33097257-33097336,33098500-33098926,33100007-331000... 29 1.8
12_02_0588 - 20842209-20842337,20842464-20842560,20842620-208427... 28 3.1
08_01_0825 + 8004693-8004698,8005365-8005466,8005830-8005877,800... 28 4.1
07_01_0043 + 343777-343953,345198-346716,346831-346977,347378-34... 28 4.1
03_05_0721 + 27134277-27134666,27135401-27135466,27137036-271371... 28 4.1
02_05_1224 + 35045268-35045270,35045735-35045863,35046037-350461... 28 4.1
06_03_0434 + 20725996-20726026,20726300-20726947,20727168-207272... 27 5.4
01_07_0119 + 41179458-41179533,41180455-41180921 27 7.2
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +2
Query: 152 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIA 247
++RKA++G+GTDE A+I++L R QR EIA
Sbjct: 65 SIRKAVQGWGTDENALIEILGHRTAAQRAEIA 96
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 342 SPAPLLR*RSSTDAVSGIGTDEEAIIEIL 428
+P+P S AV G GTDE A+IEIL
Sbjct: 56 APSPTEDAESIRKAVQGWGTDENALIEIL 84
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 36.3 bits (80), Expect = 0.012
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2
Query: 155 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEI 244
LRKA KG+GT+EK II +L R QR I
Sbjct: 20 LRKAFKGWGTNEKLIISILAHRDAAQRRAI 49
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 35.5 bits (78), Expect = 0.020
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +2
Query: 155 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAET 253
L KA +G+GTDE+A+I VL R QR +I T
Sbjct: 20 LLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLT 52
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 262 NYGKDLISELKSELTGNLENVI 327
NY ++LI L+SEL+G+LE +
Sbjct: 56 NYNENLIQRLQSELSGDLERAM 77
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 32.3 bits (70), Expect = 0.19
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 155 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEI 244
LRKA +G+GT+E II +L R QR I
Sbjct: 20 LRKAFQGWGTNEALIISILAHRDAAQRRAI 49
>07_01_0390 + 2931331-2932299
Length = 322
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 268 GKDLISELKSELTGNLENVIVALMTPLPHFYAKGAPPMLSQELEPTKKPSSR 423
G D E++ ++T LE+ TP+P G PP LS + T+ P R
Sbjct: 240 GTDTEPEIEPDITDPLEDE-----TPVPRITFLGGPPTLSTARKSTRPPGKR 286
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 155 LRKAMKGFGTDEKAIIDVLCRR 220
LRK+MKG GTD+ +I V+ R
Sbjct: 238 LRKSMKGMGTDDSTLIRVVVTR 259
>07_01_0616 +
4560866-4560952,4561144-4561208,4564481-4564913,
4565634-4565786,4565875-4565946,4567602-4567712,
4568344-4568584,4568743-4568821,4568892-4569018
Length = 455
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 286 ELKSELTGNLENVIVALMTPLPHFYAKGAPPMLS-QELEPTKKPSSRSCAR 435
E + E L +V P+P FY +G PP + +++ PT+ S + R
Sbjct: 271 EEQEEALKQLRKNLVIRAKPMPSFYQEGPPPKVELKKVPPTRAKSPKLTRR 321
>03_06_0317 +
33097257-33097336,33098500-33098926,33100007-33100078,
33100490-33100600,33100973-33101173,33102157-33102222
Length = 318
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 211 LPPRHRATPRDRGDLKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKGAPPMLS- 387
L +H+A ++ + + ++ + LK L +V P+P FY +G PP
Sbjct: 174 LEEKHKALEAEKNEAEARKKEEQETALKQ-----LRKSLVIRAKPMPSFYQEGPPPKAEL 228
Query: 388 QELEPTKKPSSRSCAR 435
+++ PT+ S + R
Sbjct: 229 KKVPPTRAKSPKFTRR 244
>12_02_0588 -
20842209-20842337,20842464-20842560,20842620-20842733,
20843140-20843749,20844739-20845462,20845542-20845620,
20845783-20845865,20846148-20846226,20846332-20846420,
20846499-20846591,20847288-20847337,20847417-20847600,
20849227-20849542,20849626-20849657
Length = 892
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 341 LPCPTFTLKELHRCCLRNWNRRRSHHRDPVH 433
LPC K+ HR CL+NW HRD H
Sbjct: 156 LPCKLCN-KKYHRSCLKNW----GEHRDLFH 181
>08_01_0825 +
8004693-8004698,8005365-8005466,8005830-8005877,
8007515-8008003
Length = 214
Score = 27.9 bits (59), Expect = 4.1
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 235 PRDRGDLKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKGAPPMLSQELEPTK 408
PR + L+T+Y + +ELK +L G A L +++G P E+E T+
Sbjct: 31 PRLKTTLQTSYVAYMFAELKEQLNGRGNTTDRAHGGDLYAVFSRGGCPRGGDEIESTR 88
>07_01_0043 +
343777-343953,345198-346716,346831-346977,347378-347940
Length = 801
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 178 RHR*EGYHRRALPPRHRATPRDRGDLKTNYGKDLISELKSELTGNLEN 321
+ R + R P H++ D DLK KD+ ELK TG +N
Sbjct: 403 QERKDNLWNRDSTPYHKSLVIDASDLKLCDSKDISEELKHNRTGINDN 450
>03_05_0721 +
27134277-27134666,27135401-27135466,27137036-27137191,
27137286-27137453,27137544-27137711
Length = 315
Score = 27.9 bits (59), Expect = 4.1
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Frame = -2
Query: 205 VDDSLLIGAEALHSLAKGLGIR-GRVER-----LRGVHRGGALVRV---VLLSAHVEILL 53
VDDSL A+A+H L + LG + GR ++ + +H A+ R+ + L H+ I+
Sbjct: 140 VDDSLAQCAKAVHVLCRALGGKTGRSKKGWDIGVNCIHPTAAMARLFSPIKLPVHMPIIE 199
Query: 52 FNSD 41
F+ D
Sbjct: 200 FHQD 203
>02_05_1224 +
35045268-35045270,35045735-35045863,35046037-35046180,
35046306-35046451,35046583-35046739,35046838-35046896,
35046978-35047137,35047716-35047865,35047969-35048105,
35048186-35048332,35048428-35048540,35048880-35048971,
35049637-35049738,35050108-35050145,35050255-35050381,
35050462-35050632,35050721-35050852,35050929-35051038,
35051118-35051178,35051386-35051427,35051756-35051933,
35052043-35052248,35052843-35052962,35053138-35053182,
35053310-35053408,35053846-35054058,35054254-35054393,
35054469-35054583,35054684-35054722,35054816-35054899,
35054969-35055139,35055891-35056100,35056193-35056378,
35056473-35056601,35056679-35056749,35056834-35056933,
35057016-35057072,35057778-35057834,35057940-35058020,
35058256-35058338,35058448-35058562
Length = 1572
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 155 LRKAMKGFGTDEKAIIDVLCRRGIVQRLE 241
L+ A + F DEKA+ D LC+R IV R E
Sbjct: 354 LKTAAELFMCDEKALEDSLCKRIIVTRDE 382
>06_03_0434 +
20725996-20726026,20726300-20726947,20727168-20727230,
20727300-20727458,20727750-20728247,20729068-20729321,
20729448-20729829,20729938-20730204,20730530-20730789
Length = 853
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 232 TPRDRGDLKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKGAP 375
TP+DR DL K + E+K++L IV T + F +G P
Sbjct: 563 TPQDRPDLIVRVFKAKLEEMKTQLVEKSILGIVKAYTYVVEFQKRGLP 610
>01_07_0119 + 41179458-41179533,41180455-41180921
Length = 180
Score = 27.1 bits (57), Expect = 7.2
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -2
Query: 181 AEALHSLAKGLGIRGRVERLRGVHRGGALVRVVLLSAHVEILLFNSDTPNHTRPE-RIPK 5
+++LHS G+ ++ R + +HR ++VV+++A I F T T P+ R+ K
Sbjct: 32 SQSLHSSFGGVSLQCRRTKPASLHRSRPSMQVVMMAARPAI-QFIQGTDEQTIPDVRLTK 90
Query: 4 S 2
S
Sbjct: 91 S 91
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,203,832
Number of Sequences: 37544
Number of extensions: 203093
Number of successful extensions: 730
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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