Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0518
         (455 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    24   0.68 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   2.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   2.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   6.3  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   6.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   6.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.4  

>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 24.2 bits (50), Expect = 0.68
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 196 YHRRALPPRHRATPRDRGDL 255
           Y RRA PP+   T +D+G +
Sbjct: 247 YERRATPPQPDRTSKDQGTI 266


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 214 PPRHRATPRDRGDLKTNYGKDLISELKSELTGNLENVI 327
           P R +       +L  N  K ++ E + E+TG ++N+I
Sbjct: 327 PKRIQYAQHKENELYANLMK-IVHEKQQEITGLIQNII 363


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 214 PPRHRATPRDRGDLKTNYGKDLISELKSELTGNLENVI 327
           P R +       +L  N  K ++ E + E+TG ++N+I
Sbjct: 365 PKRIQYAQHKENELYANLMK-IVHEKQQEITGLIQNII 401


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 347 CPTFTLKELHRC 382
           CPT  +KE+ RC
Sbjct: 261 CPTRNVKEMIRC 272


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 347 CPTFTLKELHRC 382
           CPT  +KE+ RC
Sbjct: 132 CPTRNVKEMIRC 143


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 347 CPTFTLKELHRC 382
           CPT  +KE+ RC
Sbjct: 261 CPTRNVKEMIRC 272


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 398 NRRRSHHRDPVHAF 439
           N+R  H+  PVH F
Sbjct: 582 NKRSIHNNYPVHTF 595


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 75  PLMLRFFCLTATHPTTQ 25
           P +LR+F   AT+P  Q
Sbjct: 830 PNLLRYFASIATNPKEQ 846


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,955
Number of Sequences: 438
Number of extensions: 1887
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)