Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0518
(455 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g38760.1 68415.m04759 annexin 3 (ANN3) nearly identical to an... 40 8e-04
At5g12380.1 68418.m01456 annexin, putative similar to annexin [F... 32 0.16
At5g10230.1 68418.m01187 annexin 7 (ANN7) nearly identical to ca... 32 0.16
At5g10220.1 68418.m01185 annexin 6 (ANN6) nearly identical to ca... 32 0.16
At1g70950.1 68414.m08185 expressed protein 30 0.65
At1g68090.1 68414.m07778 annexin 5 (ANN5) identical to calcium-b... 30 0.65
At1g76270.1 68414.m08856 expressed protein contains Pfam PF03138... 29 1.5
At1g54460.1 68414.m06212 expressed protein 28 2.6
At5g45230.1 68418.m05551 disease resistance protein (TIR-NBS-LRR... 27 4.5
At2g41640.1 68415.m05145 expressed protein contains Pfam domain,... 27 4.5
At1g17980.2 68414.m02224 nucleotidyltransferase family protein c... 27 4.5
At1g17980.1 68414.m02225 nucleotidyltransferase family protein c... 27 4.5
At4g32330.2 68417.m04600 expressed protein 27 6.0
At4g32330.1 68417.m04599 expressed protein 27 6.0
At4g19900.1 68417.m02916 glycosyl transferase-related contains P... 27 6.0
At3g47680.1 68416.m05192 expressed protein contains similarity t... 27 6.0
At4g28710.1 68417.m04106 myosin heavy chain, putative similar to... 27 7.9
At3g12200.1 68416.m01521 protein kinase family protein contains ... 27 7.9
At2g20010.1 68415.m02339 expressed protein 27 7.9
At1g20550.1 68414.m02561 expressed protein contains Pfam PF03138... 27 7.9
>At2g38760.1 68415.m04759 annexin 3 (ANN3) nearly identical to
annexin (AnnAt3) [Arabidopsis thaliana] GI:6503082;
contains Pfam profile PF00191: Annexin
Length = 321
Score = 39.9 bits (89), Expect = 8e-04
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +2
Query: 152 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETSR 259
TL++A++G+GTDEKAII VL +R QR +I E+ R
Sbjct: 19 TLKQAIRGWGTDEKAIIRVLGQRDQSQRRKIRESFR 54
Score = 29.9 bits (64), Expect = 0.85
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 205 RALPPRHRATPRD-RGDLKTNYGKDLISELKSELTGNLENVIVA 333
R L R ++ R R + YGKDLI L SEL+G+ +V+
Sbjct: 36 RVLGQRDQSQRRKIRESFREIYGKDLIDVLSSELSGDFMKAVVS 79
Score = 26.6 bits (56), Expect = 7.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 336 DDSPAPLLR*RSSTDAVSGIGTDEEAIIEIL 428
++ P+P + A+ G GTDE+AII +L
Sbjct: 8 NEVPSPAQDSETLKQAIRGWGTDEKAIIRVL 38
>At5g12380.1 68418.m01456 annexin, putative similar to annexin
[Fragaria x ananassa] GI:6010777, annexin p33 [Zea mays]
GI:6272285; contains Pfam profile PF00191: Annexin
Length = 316
Score = 32.3 bits (70), Expect = 0.16
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +1
Query: 265 YGKDLISELKSELTGNLENVIVALMTPLPHFYAKGAPPMLSQELEPTKKPSSRSCARFP 441
Y +DLI +LKSEL+GN E I + P A A L + + K +C R P
Sbjct: 56 YHEDLIHQLKSELSGNFERAICLWVLDPPERDALLANLALQKPIPDYKVLVEIACMRSP 114
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 155 LRKAMKGFGTDEKAIIDVLCRRGIVQR 235
++ A +G+GT+E AII +L R + QR
Sbjct: 19 IKAACQGWGTNENAIISILGHRNLFQR 45
>At5g10230.1 68418.m01187 annexin 7 (ANN7) nearly identical to
calcium-binding protein annexin 7 [Arabidopsis thaliana]
GI:12667522
Length = 316
Score = 32.3 bits (70), Expect = 0.16
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 155 LRKAMKGFGTDEKAIIDVLCRRGIVQR 235
L KA KG+GT+E+ II +L R QR
Sbjct: 20 LYKAFKGWGTNERMIISILAHRNATQR 46
Score = 30.3 bits (65), Expect = 0.65
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +1
Query: 223 HR-ATPRD--RGDLKTNYGKDLISELKSELTGNLENVIV 330
HR AT R R NY KDL+ EL EL+G+ E ++
Sbjct: 40 HRNATQRSFIRAVYAANYNKDLLKELDRELSGDFERAVM 78
>At5g10220.1 68418.m01185 annexin 6 (ANN6) nearly identical to
calcium-binding protein annexin 6 [Arabidopsis thaliana]
GI:12667518
Length = 318
Score = 32.3 bits (70), Expect = 0.16
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 223 HR-ATPRD--RGDLKTNYGKDLISELKSELTGNLENVIV 330
HR AT R R NY KDL+ EL EL+G+ E V++
Sbjct: 40 HRNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVM 78
Score = 31.5 bits (68), Expect = 0.28
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 155 LRKAMKGFGTDEKAIIDVLCRRGIVQR 235
L KA KG+GT+E II +L R QR
Sbjct: 20 LHKAFKGWGTNEGMIISILAHRNATQR 46
>At1g70950.1 68414.m08185 expressed protein
Length = 478
Score = 30.3 bits (65), Expect = 0.65
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 340 TPLPHFYAKGAPPMLSQELEPTKKPSSRS 426
TP+P FY G P+ + EP+K SRS
Sbjct: 384 TPMPSFYNIGTRPVSHNKTEPSKVAQSRS 412
>At1g68090.1 68414.m07778 annexin 5 (ANN5) identical to
calcium-binding protein annexin 5 [Arabidopsis thaliana]
GI:12667520
Length = 316
Score = 30.3 bits (65), Expect = 0.65
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 155 LRKAMKGFGTDEKAIIDVLCRRGIV 229
LRK+MKG GTD+ A+I ++ R V
Sbjct: 251 LRKSMKGLGTDDTALIRIVVTRAEV 275
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 155 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAE 250
L+++++G TD KAI +++C R Q +I +
Sbjct: 92 LKRSLRGAVTDHKAIAEIICTRSGSQLRQIKQ 123
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 244 RGDLKTNYGKDLISELKSELTGNLENVIVALM 339
R ++ YGK+L ++ E GN E+V++ ++
Sbjct: 206 RSTYRSMYGKELGKAIRDETRGNFEHVLLTIL 237
>At1g76270.1 68414.m08856 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as '
auxin-independent growth promoter -related' based on
similarity to axi 1 protein (GB:X80301) (GI:559920) from
[Nicotiana tabacum], which, due to scienitific fraud was
retracted. Retraction in: Schell J. EMBO J 1999 May
17;18(10):2908. PMID:10400497.
Length = 572
Score = 29.1 bits (62), Expect = 1.5
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 265 YGKDL-ISELKSELTGNLENVIVALMTPLPHFYAKGAPPMLSQELEPTKKPSSRSCA 432
YG D+ I E+ G E+ + L PHFY+K +ELEP SSR A
Sbjct: 339 YGSDVHIYVASGEVYGGEES-LAPLKALFPHFYSKDT-IATKEELEPFSSYSSRMAA 393
>At1g54460.1 68414.m06212 expressed protein
Length = 338
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +1
Query: 280 ISELKSELTGNLENVIVALMTPLPHFYAKGAPPMLSQELEPTKKPSSRSCAR 435
+ E + +T L + P+P FY +G PP + P +P S + R
Sbjct: 201 LKEEQEAVTKQLRKNMAYKANPVPSFYQEGPPPKQPLKKFPLTRPKSPNLNR 252
>At5g45230.1 68418.m05551 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1231
Score = 27.5 bits (58), Expect = 4.5
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 341 LPCPTFTLKELHRCCLRNWNRRRSHHRDPVHAFQL 445
LPC F L L R CL + R+ D H F L
Sbjct: 834 LPCSIFHLSSLRRLCLSRNDNIRTLRFDMGHMFHL 868
>At2g41640.1 68415.m05145 expressed protein contains Pfam domain,
PF04577: Protein of unknown function (DUF563)
Length = 500
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 76 SAHVEILLFNSDTPNHTRPERI 11
SA I LF S T N+T+PE+I
Sbjct: 121 SASSSIFLFTSSTNNNTKPEKI 142
>At1g17980.2 68414.m02224 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain
Length = 586
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 303 EFTLEFANQVLAIVSLEVSAISRRCTMPRRQSTS 202
E + +F NQV+ +S +V+ +S T+P ++TS
Sbjct: 504 EESFDFGNQVIEQISHKVAVLSATATIPPFEATS 537
>At1g17980.1 68414.m02225 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain
Length = 713
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 303 EFTLEFANQVLAIVSLEVSAISRRCTMPRRQSTS 202
E + +F NQV+ +S +V+ +S T+P ++TS
Sbjct: 631 EESFDFGNQVIEQISHKVAVLSATATIPPFEATS 664
>At4g32330.2 68417.m04600 expressed protein
Length = 436
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 340 TPLPHFYAKGAPPMLSQELEPTKKPSSRSCARFPT 444
TP+P FY + PP + P +P S R T
Sbjct: 262 TPMPSFYQEPQPPKTELKKIPPTRPKSPKLGRKKT 296
>At4g32330.1 68417.m04599 expressed protein
Length = 437
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 340 TPLPHFYAKGAPPMLSQELEPTKKPSSRSCARFPT 444
TP+P FY + PP + P +P S R T
Sbjct: 263 TPMPSFYQEPQPPKTELKKIPPTRPKSPKLGRKKT 297
>At4g19900.1 68417.m02916 glycosyl transferase-related contains Pfam
profiles PF01535: PPR repeat, PF04572: Alpha
1,4-glycosyltransferase conserved region, PF04488:
Glycosyltransferase sugar-binding region containing DXD
motif; several hypothetical proteins - Arabidopsis
thaliana
Length = 1302
Score = 27.1 bits (57), Expect = 6.0
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = -2
Query: 145 IRGRVERLRGVHRGGALVRVVLLSAHVEIL-----LFNSDTPNHTR 23
+R R R R + A++ VLL A V +L LF+S +PNH R
Sbjct: 2 LRSRRSRSRHGAQACAVMSAVLLLASVSLLYTRLSLFSSHSPNHLR 47
>At3g47680.1 68416.m05192 expressed protein contains similarity to
hypothetical proteins of [Arabidopsis thaliana]
Length = 302
Score = 27.1 bits (57), Expect = 6.0
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Frame = -3
Query: 348 QGSHQCDDDIFQVA--------GEFTLEFANQVLAIVSLEVSAISRRCTMPRRQSTSMIA 193
+ S Q DDD+ +A G+FTLE A +VL +SA S + T+ ++ S A
Sbjct: 130 KSSGQNDDDVVALAHEIYNSEHGKFTLEHAWRVLRFEQKWLSAPSTKATVMSKRRKSDKA 189
Query: 192 FSSVPK 175
+S P+
Sbjct: 190 STSQPQ 195
>At4g28710.1 68417.m04106 myosin heavy chain, putative similar to
myosin [Arabidopsis thaliana] gi|499047|emb|CAA84066.
Length = 899
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 155 LRKAMKGFGTDEKAIIDVLCRRGIVQRLE 241
L+ A + F DE+A+ D LC+R IV R E
Sbjct: 353 LKTAAELFMCDEQALEDSLCKRVIVTRGE 381
>At3g12200.1 68416.m01521 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 571
Score = 26.6 bits (56), Expect = 7.9
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 232 TPRD---RGDLKTNYGKDLISELKSELTGNLENV 324
+P+D R L +GK+ +S KSE++ +LEN+
Sbjct: 298 SPKDKARRNSLPGKFGKERVSREKSEVSRSLENL 331
>At2g20010.1 68415.m02339 expressed protein
Length = 834
Score = 26.6 bits (56), Expect = 7.9
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 158 RKAMKGFGTDEKAIIDVLCRRGIVQ--RLEIAETSRLTMAR 274
RK+ G G D I+ CR +Q R EI + R T+ R
Sbjct: 567 RKSQLGTGNDSAEILQFCCRINTLQYIRTEIESSGRKTLNR 607
>At1g20550.1 68414.m02561 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as 'axi
1 protein -related' based on similarity to axi 1
protein (GB:X80301) (GI:559920) from [Nicotiana
tabacum], which, due to scienitific fraud was retracted.
Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908.
PMID:10400497.
Length = 526
Score = 26.6 bits (56), Expect = 7.9
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 265 YGKDL-ISELKSELTGNLENVIVALMTPLPHFYAKGAPPMLSQELEPTKKPSSRSCA 432
YG D+ I E+ G E + L PHFY+K EL+P SSR A
Sbjct: 304 YGSDVHIYVASGEVYGG-EKSLAPLKALFPHFYSKDT-IATKMELKPFSSYSSRMAA 358
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,649,863
Number of Sequences: 28952
Number of extensions: 150121
Number of successful extensions: 508
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 752336160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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