Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0515
         (474 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   3.3  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   5.8  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   7.7  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   7.7  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +2

Query: 167 SCNLSELITNIIMTSEPMWKQESSKKLTSIHLRGDISAR 283
           SC   E+ + +I T      +  +  +TSIHLRG I  R
Sbjct: 111 SCISEEVWSKLIETGN----KPPTLPVTSIHLRGAIGQR 145


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -2

Query: 401 ISPTSDRSTPCPDSLHHPL 345
           + P      P  D LHHP+
Sbjct: 28  VQPLPRHFNPPSDKLHHPI 46


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 388 PTAVLRARTAY 356
           PTA  RARTAY
Sbjct: 85  PTAGKRARTAY 95


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 244 AYIYSPTRRHIRSLRV 291
           +YI+ P  RH+ S  V
Sbjct: 371 SYIHDPDHRHLESFGV 386


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 388 PTAVLRARTAY 356
           PTA  RARTAY
Sbjct: 76  PTAGKRARTAY 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,698
Number of Sequences: 336
Number of extensions: 1799
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)