Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0515
         (474 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ418878-1|ABD77422.1| 1765|Drosophila melanogaster echinus spli...    30   1.8  
AL031130-3|CAA20016.1| 1761|Drosophila melanogaster EG:EG0002.3 ...    30   1.8  
BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p pro...    29   3.2  
AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB...    29   3.2  
BT011119-1|AAR82786.1| 1066|Drosophila melanogaster LD15941p pro...    27   9.8  
AE013599-815|AAF58971.2| 2408|Drosophila melanogaster CG8014-PA ...    27   9.8  

>DQ418878-1|ABD77422.1| 1765|Drosophila melanogaster echinus splice
           form 3 protein.
          Length = 1765

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 398 SPTSDRSTPCPDSLHHPLTRINHKLRN 318
           SPTS  S P P   HHP  ++ H + N
Sbjct: 38  SPTSPVSVPVPVQAHHPHPQLGHLISN 64


>AL031130-3|CAA20016.1| 1761|Drosophila melanogaster EG:EG0002.3
           protein.
          Length = 1761

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 398 SPTSDRSTPCPDSLHHPLTRINHKLRN 318
           SPTS  S P P   HHP  ++ H + N
Sbjct: 38  SPTSPVSVPVPVQAHHPHPQLGHLISN 64


>BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p
           protein.
          Length = 1047

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +2

Query: 290 LRQIEYSCLNYGVYDLF--ELEDDVGCPGTEYC 382
           L++ E  C+N G++ +F  +++ D  CPG E C
Sbjct: 341 LKECEGECMN-GIFAIFCDDIDSDAFCPGEESC 372


>AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB
           protein.
          Length = 1047

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +2

Query: 290 LRQIEYSCLNYGVYDLF--ELEDDVGCPGTEYC 382
           L++ E  C+N G++ +F  +++ D  CPG E C
Sbjct: 341 LKECEGECMN-GIFAIFCDDIDSDAFCPGEESC 372


>BT011119-1|AAR82786.1| 1066|Drosophila melanogaster LD15941p
           protein.
          Length = 1066

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +1

Query: 70  KDFISPQFTYTIEKIHTDQDEINNIMSYFRYD 165
           KDF+  Q T + ++ H D  +++ ++S F +D
Sbjct: 403 KDFLEQQRTASAKETHEDIAQVSELVSSFEFD 434


>AE013599-815|AAF58971.2| 2408|Drosophila melanogaster CG8014-PA
            protein.
          Length = 2408

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +1

Query: 70   KDFISPQFTYTIEKIHTDQDEINNIMSYFRYD 165
            KDF+  Q T + ++ H D  +++ ++S F +D
Sbjct: 1745 KDFLEQQRTASAKETHEDIAQVSELVSSFEFD 1776


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,098,419
Number of Sequences: 53049
Number of extensions: 313979
Number of successful extensions: 898
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)