Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0514
         (555 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0265 + 2148255-2150219,2150735-2150812                           31   0.47 
01_05_0769 - 25042022-25042447,25042856-25043234,25043714-250437...    27   7.6  

>08_01_0265 + 2148255-2150219,2150735-2150812
          Length = 680

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = -1

Query: 411 STALIDIAAKYGLAYDLKTVSEKM-IRNRIN----RTGDGTHPWAKQKAELEED 265
           +TAL+D+  K+GL  D + V E+M IRN I+      G G H   ++  E+ E+
Sbjct: 356 NTALVDLYCKWGLMEDARNVFERMPIRNLISWNALIAGYGYHGMGQKAIEMFEE 409


>01_05_0769 -
           25042022-25042447,25042856-25043234,25043714-25043763,
           25044222-25044442,25045085-25045385
          Length = 458

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = -1

Query: 297 WAKQKAELEEDHHHQKTLYGAGAIKTCQTMIRNWRKLFTKRMTRYKQLKR 148
           WAK +  L    HH+K       +K     I   + L TK   R ++++R
Sbjct: 157 WAKHRRILNPAFHHEKIKLPKTVVKNAPLRIVKLKFLPTKNNRRLREIER 206


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,130,963
Number of Sequences: 37544
Number of extensions: 270839
Number of successful extensions: 721
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)