Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0514
(555 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25798| Best HMM Match : FA_desaturase (HMM E-Value=0) 69 3e-12
SB_42121| Best HMM Match : EGF_CA (HMM E-Value=8.7) 34 0.090
SB_38801| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11) 29 1.9
SB_40823| Best HMM Match : rve (HMM E-Value=1.4e-12) 29 2.6
SB_45595| Best HMM Match : rve (HMM E-Value=7.9e-06) 29 2.6
SB_44218| Best HMM Match : rve (HMM E-Value=1.5e-12) 29 2.6
SB_8862| Best HMM Match : rve (HMM E-Value=3.3e-12) 29 2.6
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_42130| Best HMM Match : rve (HMM E-Value=5.9e-13) 28 4.5
SB_34320| Best HMM Match : Ponericin (HMM E-Value=1.2) 27 7.8
SB_8366| Best HMM Match : Ponericin (HMM E-Value=2.9) 27 7.8
SB_2784| Best HMM Match : UCR_14kD (HMM E-Value=1.5) 27 7.8
SB_32862| Best HMM Match : CaM_binding (HMM E-Value=1.4) 27 7.8
SB_20028| Best HMM Match : Ponericin (HMM E-Value=2.9) 27 7.8
SB_2167| Best HMM Match : Ponericin (HMM E-Value=3.2) 27 7.8
>SB_25798| Best HMM Match : FA_desaturase (HMM E-Value=0)
Length = 268
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/60 (55%), Positives = 40/60 (66%)
Frame = -1
Query: 492 GEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIRNRINRTG 313
GEG+HNYHH FP DY A+E G N+ST LID+ A GL D K V ++ IR R+ RTG
Sbjct: 198 GEGYHNYHHTFPQDYAASEFGT-RLNMSTRLIDMWAAMGLVSDRKVVPKETIRKRMMRTG 256
>SB_42121| Best HMM Match : EGF_CA (HMM E-Value=8.7)
Length = 202
Score = 33.9 bits (74), Expect = 0.090
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1
Query: 453 DYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIR 334
DY A+E G N+ST LID+ A GL D K V ++ IR
Sbjct: 77 DYAASEFGT-RLNMSTRLIDMWAAMGLVSDRKVVPKETIR 115
>SB_38801| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -1
Query: 465 VFPWDYKAAELGDYSTNLSTALIDIAAKYG 376
+ PW + A+++G+Y L +ID +K+G
Sbjct: 221 LLPWQHIASDIGEYQGKLYLVVIDYYSKHG 250
>SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11)
Length = 1702
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -1
Query: 465 VFPWDYKAAELGDYSTNLSTALIDIAAKYG 376
+ PW + A+++G+Y L +ID +K+G
Sbjct: 1493 LLPWQHIASDIGEYQGKLYLVVIDYYSKHG 1522
>SB_40823| Best HMM Match : rve (HMM E-Value=1.4e-12)
Length = 651
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 465 VFPWDYKAAELGDYSTNLSTALIDIAAKY 379
+ PW + A+++G+Y L +ID +KY
Sbjct: 447 LLPWQHIASDIGEYQGKLYLVVIDYYSKY 475
>SB_45595| Best HMM Match : rve (HMM E-Value=7.9e-06)
Length = 200
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 465 VFPWDYKAAELGDYSTNLSTALIDIAAKY 379
+ PW + A+++G+Y L +ID +KY
Sbjct: 76 LLPWQHIASDIGEYQGKLYLVVIDYYSKY 104
>SB_44218| Best HMM Match : rve (HMM E-Value=1.5e-12)
Length = 507
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 465 VFPWDYKAAELGDYSTNLSTALIDIAAKY 379
+ PW + A+++G+Y L +ID +KY
Sbjct: 222 LLPWQHIASDIGEYQGKLYLVVIDYYSKY 250
>SB_8862| Best HMM Match : rve (HMM E-Value=3.3e-12)
Length = 1358
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 465 VFPWDYKAAELGDYSTNLSTALIDIAAKY 379
+ PW + A+++G+Y L +ID +KY
Sbjct: 1073 LLPWQHIASDIGEYQGKLYLVVIDYYSKY 1101
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -2
Query: 530 GATDNKTGRSVL*ARVGTTIITYFPGTTKRPSSETTAPIYQPP*LTSLQNTA 375
G+T N + S R G+T T P T+ +S T AP P S T+
Sbjct: 29 GSTTNTSAPSTSTPRTGSTTTTSAPSTSTTSNSTTRAPSTSTPRAGSTTTTS 80
>SB_42130| Best HMM Match : rve (HMM E-Value=5.9e-13)
Length = 975
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 465 VFPWDYKAAELGDYSTNLSTALIDIAAKY 379
+ PW + A ++G+Y L +ID +KY
Sbjct: 690 LLPWQHIALDIGEYQGKLYLVVIDYYSKY 718
>SB_34320| Best HMM Match : Ponericin (HMM E-Value=1.2)
Length = 303
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 243 YGAGAIKTCQTMIRNWRKLFTKRMTRYKQL 154
YGAG +K +T + N + KRMT Y L
Sbjct: 47 YGAGVVKWTKTELENIDRKTRKRMTIYGML 76
>SB_8366| Best HMM Match : Ponericin (HMM E-Value=2.9)
Length = 307
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 243 YGAGAIKTCQTMIRNWRKLFTKRMTRYKQL 154
YGAG +K +T + N + KRMT Y L
Sbjct: 13 YGAGVVKWTKTELENIDRKTRKRMTIYGML 42
>SB_2784| Best HMM Match : UCR_14kD (HMM E-Value=1.5)
Length = 413
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 243 YGAGAIKTCQTMIRNWRKLFTKRMTRYKQL 154
YGAG +K +T + N + KRMT Y L
Sbjct: 218 YGAGVVKWTKTELENIDRKTRKRMTIYGML 247
>SB_32862| Best HMM Match : CaM_binding (HMM E-Value=1.4)
Length = 202
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 243 YGAGAIKTCQTMIRNWRKLFTKRMTRYKQL 154
YGAG +K +T + N + KRMT Y L
Sbjct: 13 YGAGVVKWTKTELENIDRKTRKRMTIYGML 42
>SB_20028| Best HMM Match : Ponericin (HMM E-Value=2.9)
Length = 279
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 243 YGAGAIKTCQTMIRNWRKLFTKRMTRYKQL 154
YGAG +K +T + N + KRMT Y L
Sbjct: 13 YGAGVVKWTKTELENIDRKTRKRMTIYGML 42
>SB_2167| Best HMM Match : Ponericin (HMM E-Value=3.2)
Length = 298
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 243 YGAGAIKTCQTMIRNWRKLFTKRMTRYKQL 154
YGAG +K +T + N + KRMT Y L
Sbjct: 14 YGAGVVKWTKTELENIDRKTRKRMTIYGML 43
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,173,693
Number of Sequences: 59808
Number of extensions: 312425
Number of successful extensions: 784
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1288581898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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