Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0514
(555 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 65 4e-11
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 65 4e-11
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 62 3e-10
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 62 3e-10
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 61 5e-10
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 61 5e-10
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 2.2
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.2
AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical... 29 3.0
AF039716-9|AAB96734.2| 548|Caenorhabditis elegans Hypothetical ... 28 3.9
U41993-2|AAO12432.1| 118|Caenorhabditis elegans Hypothetical pr... 28 5.2
U41993-1|AAO12433.1| 390|Caenorhabditis elegans Hypothetical pr... 28 5.2
AL132877-18|CAC70116.1| 362|Caenorhabditis elegans Hypothetical... 27 9.1
AL032643-7|CAA21659.2| 362|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 64.9 bits (151), Expect = 4e-11
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = -1
Query: 507 AICALGEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIRNR 328
+I A+GEG HNYHH FP DY+ +E ++ N + LID A G+ YD KT E++I+ +
Sbjct: 257 SIAAVGEGGHNYHHTFPQDYRTSEHAEF-LNWTRVLIDFGASIGMVYDRKTTPEEVIQRQ 315
Query: 327 INRTG 313
+ G
Sbjct: 316 CKKFG 320
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 64.9 bits (151), Expect = 4e-11
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = -1
Query: 507 AICALGEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIRNR 328
+I A+GEG HNYHH FP DY+ +E ++ N + LID A G+ YD KT E++I+ +
Sbjct: 257 SIAAVGEGGHNYHHTFPQDYRTSEHAEF-LNWTRVLIDFGASIGMVYDRKTTPEEVIQRQ 315
Query: 327 INRTG 313
+ G
Sbjct: 316 CKKFG 320
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 61.7 bits (143), Expect = 3e-10
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = -1
Query: 504 ICALGEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIRNRI 325
+ A+GEG HN+HH FP DY+A+E N + LID AA GL YD KT++++ I ++
Sbjct: 266 VVAVGEGGHNFHHTFPQDYRASEY-SLIYNWTRVLIDTAAVLGLVYDRKTIADEFISRQV 324
Query: 324 NRTG 313
G
Sbjct: 325 ANHG 328
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 61.7 bits (143), Expect = 3e-10
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = -1
Query: 504 ICALGEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIRNRI 325
+ A+GEG HN+HH FP DY+A+E N + LID AA GL YD KT++++ I ++
Sbjct: 266 VVAVGEGGHNFHHTFPQDYRASEY-SLIYNWTRVLIDTAAVLGLVYDRKTIADEFISRQV 324
Query: 324 NRTG 313
G
Sbjct: 325 ANHG 328
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 61.3 bits (142), Expect = 5e-10
Identities = 28/64 (43%), Positives = 39/64 (60%)
Frame = -1
Query: 504 ICALGEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIRNRI 325
I A+GEG HN+HH FP DY+ +E N + LID AA GL YD KT +++I ++
Sbjct: 267 IAAVGEGGHNFHHTFPQDYRTSEY-SLKYNWTRVLIDTAAALGLVYDRKTACDEIIGRQV 325
Query: 324 NRTG 313
+ G
Sbjct: 326 SNHG 329
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 61.3 bits (142), Expect = 5e-10
Identities = 28/64 (43%), Positives = 39/64 (60%)
Frame = -1
Query: 504 ICALGEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIRNRI 325
I A+GEG HN+HH FP DY+ +E N + LID AA GL YD KT +++I ++
Sbjct: 267 IAAVGEGGHNFHHTFPQDYRTSEY-SLKYNWTRVLIDTAAALGLVYDRKTACDEIIGRQV 325
Query: 324 NRTG 313
+ G
Sbjct: 326 SNHG 329
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -2
Query: 482 GTTIITYFPGTTKRPSSETTAPIYQPP*LTSLQNTA 375
GTT + P TT P+++TTAP+ +P +S TA
Sbjct: 520 GTTTVPV-PTTTGSPTTQTTAPVTKPTVPSSTTQTA 554
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -2
Query: 482 GTTIITYFPGTTKRPSSETTAPIYQPP*LTSLQNTA 375
GTT + P TT P+++TTAP+ +P +S TA
Sbjct: 576 GTTTVPV-PTTTGSPTTQTTAPVTKPTVPSSTTQTA 610
>AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical
protein Y48G1C.8 protein.
Length = 828
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 354 VSEKMIRNRINRTGDGTHPWAKQKA 280
V + N+IN TGDG PW A
Sbjct: 444 VPANFVANQINHTGDGLSPWTVNPA 468
>AF039716-9|AAB96734.2| 548|Caenorhabditis elegans Hypothetical
protein W03G9.7 protein.
Length = 548
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 366 DLKTVSEKMIRNRINRTGDGTHPWAKQKAELEEDHHHQKTL 244
DLK + + +R+ + + G + K+KAE E+ Q+T+
Sbjct: 134 DLKNIEQPSVRDYLKQQGQWDDRYLKEKAEYEDAMVRQETV 174
>U41993-2|AAO12432.1| 118|Caenorhabditis elegans Hypothetical
protein F44A2.5a protein.
Length = 118
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 458 PGTTKRPSSETTAPIYQPP*LTS 390
P TTK+P++ IY+PP L S
Sbjct: 17 PATTKKPTNRPAMQIYRPPGLRS 39
>U41993-1|AAO12433.1| 390|Caenorhabditis elegans Hypothetical
protein F44A2.5b protein.
Length = 390
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 458 PGTTKRPSSETTAPIYQPP*LTS 390
P TTK+P++ IY+PP L S
Sbjct: 17 PATTKKPTNRPAMQIYRPPGLRS 39
>AL132877-18|CAC70116.1| 362|Caenorhabditis elegans Hypothetical
protein Y54E5A.1 protein.
Length = 362
Score = 27.1 bits (57), Expect = 9.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 510 WAICALGEGWHNYHHVFPW 454
W +C G+H HH FP+
Sbjct: 249 WNLCTFNVGYHVEHHDFPY 267
>AL032643-7|CAA21659.2| 362|Caenorhabditis elegans Hypothetical
protein Y54E5A.1 protein.
Length = 362
Score = 27.1 bits (57), Expect = 9.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 510 WAICALGEGWHNYHHVFPW 454
W +C G+H HH FP+
Sbjct: 249 WNLCTFNVGYHVEHHDFPY 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,243,278
Number of Sequences: 27780
Number of extensions: 242586
Number of successful extensions: 697
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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