Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0514
(555 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15870.1 68416.m02007 fatty acid desaturase family protein si... 42 4e-04
At3g15850.1 68416.m02005 fatty acid desaturase family protein si... 41 6e-04
At1g06360.1 68414.m00672 fatty acid desaturase family protein si... 34 0.073
At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ... 34 0.073
At1g06090.1 68414.m00638 fatty acid desaturase family protein si... 33 0.097
At1g06350.1 68414.m00671 fatty acid desaturase family protein si... 33 0.13
At1g79460.1 68414.m09261 ent-kaurene synthase / ent-kaurene synt... 33 0.17
At1g06120.1 68414.m00641 fatty acid desaturase family protein si... 33 0.17
At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ... 32 0.22
At1g06100.1 68414.m00639 fatty acid desaturase family protein si... 32 0.22
>At3g15870.1 68416.m02007 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 292
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -1
Query: 513 NW--AICALGEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKM 340
NW AI LGEGWHN HH F + + L + +++ LI GLA ++K +E
Sbjct: 227 NWWVAILTLGEGWHNNHHAFEFSARHG-LEWWQLDITWCLIRFLEAIGLATNVKLPTETQ 285
Query: 339 IRNR 328
++ +
Sbjct: 286 MKGK 289
>At3g15850.1 68416.m02005 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 371
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 513 NWAICAL--GEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKM 340
NW + AL GEGWHN HH F + + L + +++ ++ GLA D+K SE
Sbjct: 304 NWWVAALAFGEGWHNNHHAFEFSARHG-LEWWQLDMTWYVVKFLQAIGLATDVKLPSEAQ 362
Query: 339 IRNRINRTGD 310
+ R+ T D
Sbjct: 363 -KQRMAFTSD 371
>At1g06360.1 68414.m00672 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 33.9 bits (74), Expect = 0.073
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -1
Query: 507 AICALGEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSE 346
++ +GE WHN HH F + L + +++ LI + GLA D+K SE
Sbjct: 237 SLFTMGESWHNNHHAFESSARQG-LEWWQIDITWYLIRLFEVLGLATDVKLPSE 289
>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
GI:2970034 from [Arabidopsis thaliana]
Length = 305
Score = 33.9 bits (74), Expect = 0.073
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -1
Query: 507 AICALGEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIR 334
++ + GE WHN HH F + L + ++S ++ GLA D+K SE R
Sbjct: 243 SVFSFGESWHNNHHAFESSARQG-LEWWQIDISWYIVRFLEIIGLATDVKLPSESQRR 299
>At1g06090.1 68414.m00638 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]
Length = 299
Score = 33.5 bits (73), Expect = 0.097
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -1
Query: 495 LGEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIR 334
+GE WHN HH F + L Y +L+ LI GLA D+K ++ R
Sbjct: 241 MGESWHNNHHAFEASARHG-LEWYQVDLTWYLICFFQALGLATDVKLPTDAQKR 293
>At1g06350.1 68414.m00671 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 300
Score = 33.1 bits (72), Expect = 0.13
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -1
Query: 507 AICALGEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSE 346
++ +GE WHN HH F + L + +++ LI + G+A D+K SE
Sbjct: 238 SLFTMGESWHNNHHAFESSARQG-LEWWQIDITWYLIRLFEVLGIATDVKLPSE 290
>At1g79460.1 68414.m09261 ent-kaurene synthase / ent-kaurene
synthetase B (KS) (GA2) identical to GI:3056725
[PMID:9536043]; formerly called ent-kaurene synthetase B
Length = 785
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 61 RNRRLNLTV*KESEINSFNINLHKMCTSETLELLISSHSFCEQFPPISYHRL 216
R + LN + + + + + LH +CTS+ L+L + +FC+ RL
Sbjct: 427 RRKILNGSAVENTRVTKTSYRLHNICTSDILKLAVDDFNFCQSIHREEMERL 478
>At1g06120.1 68414.m00641 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]; supported
by cDNA:gi_12083275_gb_AF332434.1_AF332434
Length = 299
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -1
Query: 495 LGEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIR 334
+GE WHN HH F + L Y +L+ LI GLA D+K ++ R
Sbjct: 241 MGESWHNNHHAFEASARHG-LEWYQVDLTWYLIWFFQVLGLATDVKLPTDAQKR 293
>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
[Arabidopsis thaliana]
Length = 307
Score = 32.3 bits (70), Expect = 0.22
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -1
Query: 507 AICALGEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIR 334
++ + GE WHN HH F + L + ++S ++ GLA D+K +E R
Sbjct: 245 SVFSFGESWHNNHHAFESSARQG-LEWWQIDISWYIVRFFEIIGLATDVKVPTEAQRR 301
>At1g06100.1 68414.m00639 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 32.3 bits (70), Expect = 0.22
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -1
Query: 507 AICALGEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIR 334
A+ +GE WHN HH F + L Y +++ LI GLA ++K ++ R
Sbjct: 237 ALLTMGESWHNNHHAFETSARHG-LEWYQLDITWYLIWFFQALGLATNVKLPTDAQKR 293
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,439,581
Number of Sequences: 28952
Number of extensions: 223221
Number of successful extensions: 593
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1053014392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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