Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0512
         (630 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   4.3  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   7.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   9.9  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   9.9  

>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 109 NLNSSNYTRNNLFHDFN 59
           N N++NY  NN  +++N
Sbjct: 332 NYNNNNYNNNNYNNNYN 348


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 51 KFIVVFPRILALGITIR 1
          KF+V+F  IL++ + IR
Sbjct: 3  KFLVIFVYILSVAVIIR 19


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 356 RCCKEDRQHNEYNK 397
           RC K + Q+N  NK
Sbjct: 416 RCAKSNNQNNNQNK 429


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 356 RCCKEDRQHNEYNK 397
           RC   D Q+N  NK
Sbjct: 582 RCANSDNQNNNQNK 595


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,315
Number of Sequences: 438
Number of extensions: 2463
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)