Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0511
(387 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3VZV5 Cluster: Putative uncharacterized protein; n=3; ... 34 0.83
UniRef50_Q5P8W6 Cluster: Phage-related integrase; n=6; Betaprote... 33 1.9
UniRef50_A1ZU70 Cluster: Trypsin domain protein; n=1; Microscill... 33 2.5
UniRef50_UPI0000E492A5 Cluster: PREDICTED: hypothetical protein;... 32 4.4
UniRef50_UPI0000E2443B Cluster: PREDICTED: hypothetical protein;... 32 4.4
UniRef50_Q4IWI9 Cluster: Multi antimicrobial extrusion protein M... 32 4.4
UniRef50_A0V5Z4 Cluster: Periplasmic sensor signal transduction ... 31 5.8
UniRef50_Q2UIK6 Cluster: Uncharacterized conserved protein; n=3;... 31 5.8
UniRef50_UPI0000DD7CD4 Cluster: PREDICTED: hypothetical protein;... 31 7.7
>UniRef50_Q3VZV5 Cluster: Putative uncharacterized protein; n=3;
Bacteria|Rep: Putative uncharacterized protein - Frankia
sp. EAN1pec
Length = 512
Score = 34.3 bits (75), Expect = 0.83
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 174 TSNLLHHLRHESVGRDGP-KTKSRRRPGESAAEGGRKHSLTRKAR 43
TS L+ LR S GR P + +S RRP GR+H ++R R
Sbjct: 46 TSGLVGRLRRISAGRRPPGRRRSPRRPRSRVGRSGRRHRVSRAVR 90
>UniRef50_Q5P8W6 Cluster: Phage-related integrase; n=6;
Betaproteobacteria|Rep: Phage-related integrase -
Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 472
Score = 33.1 bits (72), Expect = 1.9
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -1
Query: 159 HHLRHESVGRDG--PKTKSRRRPGESAAEGGRKHSLTRKARQDLQLD 25
H L HE++ + G P+T+ RRR + + G HSL DL D
Sbjct: 145 HMLNHENMAKAGGEPRTRGRRRGESATTQPGPLHSLLALRLSDLDAD 191
>UniRef50_A1ZU70 Cluster: Trypsin domain protein; n=1; Microscilla
marina ATCC 23134|Rep: Trypsin domain protein -
Microscilla marina ATCC 23134
Length = 383
Score = 32.7 bits (71), Expect = 2.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 221 IQLARNFFNLFQIKSISARAYKQLLQQKNDIGVIKTKVMNID 346
I L FFNL Q++S+ + LQ ++ V+K K NI+
Sbjct: 106 IFLGNTFFNLKQVRSVEEKQSTNYLQLNRELKVVKRKQKNIE 147
>UniRef50_UPI0000E492A5 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1938
Score = 31.9 bits (69), Expect = 4.4
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = -1
Query: 129 DGPKTKSRRRPGE---SAAEGGRKHSLTRKARQD 37
DGPK KS++RP + A GG+K + T K R D
Sbjct: 210 DGPKVKSKKRPRDGTGDGAVGGQKGAKTGKGRAD 243
>UniRef50_UPI0000E2443B Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 186
Score = 31.9 bits (69), Expect = 4.4
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +3
Query: 24 SLIVSLALPCELESVSVPPPPRTPLVFY---GS*SSGHPCRRSRASNDVAGL 170
SL+ + LP + + PPPP P V GHP R SRA G+
Sbjct: 21 SLLTNKLLPATMVPLCTPPPPLCPAVVQEPREGQQQGHPSRCSRAGGSPGGV 72
>UniRef50_Q4IWI9 Cluster: Multi antimicrobial extrusion protein
MatE; n=20; Pseudomonadaceae|Rep: Multi antimicrobial
extrusion protein MatE - Azotobacter vinelandii AvOP
Length = 542
Score = 31.9 bits (69), Expect = 4.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 132 RDGPKTKSRRRPGESAAEGGRKHSLTRKAR 43
R GP RRPG A GR+H+ T +AR
Sbjct: 40 RHGPHAARLRRPGRRPAVAGRRHTRTAQAR 69
>UniRef50_A0V5Z4 Cluster: Periplasmic sensor signal transduction
histidine kinase; n=1; Delftia acidovorans SPH-1|Rep:
Periplasmic sensor signal transduction histidine kinase
- Delftia acidovorans SPH-1
Length = 962
Score = 31.5 bits (68), Expect = 5.8
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 159 HHLRHESVGRDGPKTKSRRRPGESAAEGGRKHSLTRKARQ 40
HH + GR G ++ RRRPG A H L R+A Q
Sbjct: 105 HHAARGARGRAGRRSACRRRPGAGPAVAAHAH-LARRAHQ 143
>UniRef50_Q2UIK6 Cluster: Uncharacterized conserved protein; n=3;
Pezizomycotina|Rep: Uncharacterized conserved protein -
Aspergillus oryzae
Length = 578
Score = 31.5 bits (68), Expect = 5.8
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -1
Query: 162 LHHLRHESVGRD-GPKTKSRRRPGESAAEGGRKHSLTRKARQDLQLD 25
+HH RH G+ G + E AA GGRKH++ R + L+ D
Sbjct: 269 VHHHRHHDKGQQKGTMGAHGAQNAEKAANGGRKHTVYRPPARRLRDD 315
>UniRef50_UPI0000DD7CD4 Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 263
Score = 31.1 bits (67), Expect = 7.7
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +2
Query: 47 ALRVRECFRPPSAADSPGLLRLLVFGPSLPTLSCL 151
ALR PPS SP +LRLL+F P LSCL
Sbjct: 222 ALRALPPCLPPSIPSSPSILRLLLF-PLSSLLSCL 255
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,947,358
Number of Sequences: 1657284
Number of extensions: 6133586
Number of successful extensions: 21074
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21060
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -