Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0511
(387 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 22 1.8
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 22 1.8
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 22 2.4
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 22 2.4
AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 21 5.6
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 21 5.6
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 20 7.4
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 20 7.4
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 20 9.8
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 20 9.8
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 20 9.8
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 22.2 bits (45), Expect = 1.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 335 SLWFL*HRCHSFVAVTVCKHVH 270
SLWF+ VAV +C ++H
Sbjct: 223 SLWFINCTAKGRVAVWMCNNLH 244
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 22.2 bits (45), Expect = 1.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 335 SLWFL*HRCHSFVAVTVCKHVH 270
SLWF+ VAV +C ++H
Sbjct: 223 SLWFINCTAKGRVAVWMCNNLH 244
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 21.8 bits (44), Expect = 2.4
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 189 SDMFFFSFYLLFNWPAISSIYFKLNL*VHVLTNSYCNKRM 308
SD F+FSFY+ + S+Y + + + NKR+
Sbjct: 53 SDYFYFSFYITSY--TLLSVYSLFRIATNENNSLVINKRL 90
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 21.8 bits (44), Expect = 2.4
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 189 SDMFFFSFYLLFNWPAISSIYFKLNL*VHVLTNSYCNKRM 308
SD F+FSFY+ + S+Y + + + NKR+
Sbjct: 53 SDYFYFSFYITSY--TLLSVYSLFRIATNENNSLVINKRL 90
>AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical
protein protein.
Length = 205
Score = 20.6 bits (41), Expect = 5.6
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = -2
Query: 347 YQYSSLWFL*HRCHSFVAVTVCKHVHL 267
Y ++ ++F C F+A+ V VH+
Sbjct: 69 YAFTHIFFFFAICCDFIALIVVNIVHV 95
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 20.6 bits (41), Expect = 5.6
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +3
Query: 216 LLFNWPAISSIYFKLNL*VHVLTNSYCNKRMT 311
+LF +P I + N V Y N +MT
Sbjct: 251 MLFGFPIIIGCLIQFNTIVFSFCYCYYNSKMT 282
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 20.2 bits (40), Expect = 7.4
Identities = 10/44 (22%), Positives = 22/44 (50%)
Frame = +2
Query: 242 FNLFQIKSISARAYKQLLQQKNDIGVIKTKVMNIDKFRAYCEPG 373
FNL+ + S S + ++ K + +K + N ++ ++C G
Sbjct: 288 FNLYHLASKSNQLSREAKVTKTVLLGVKIDICNEEERNSHCLGG 331
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 20.2 bits (40), Expect = 7.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 299 QKNDIGVIKTKVMNI 343
+K DIG I ++MNI
Sbjct: 36 RKQDIGEILQQIMNI 50
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 19.8 bits (39), Expect = 9.8
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3
Query: 51 CELESVSVPPPP 86
C++ S PPPP
Sbjct: 207 CDVPSTIPPPPP 218
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 19.8 bits (39), Expect = 9.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 27 LIVSLALPCELESVSVPPPP 86
++ S P E V +PPPP
Sbjct: 720 MLQSPLTPHEAFDVKLPPPP 739
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 19.8 bits (39), Expect = 9.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 27 LIVSLALPCELESVSVPPPP 86
++ S P E V +PPPP
Sbjct: 612 MLQSPLTPHEAFDVKLPPPP 631
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,514
Number of Sequences: 336
Number of extensions: 1710
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8119573
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -