Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0511
         (387 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L15201-3|AAA27944.1|  262|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z82283-4|CAB05286.1|  689|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z72505-1|CAA96608.1|  338|Caenorhabditis elegans Hypothetical pr...    27   6.1  
L14710-2|AAA28083.1|  124|Caenorhabditis elegans Hypothetical pr...    27   6.1  
AF098999-2|AAC68728.3|  369|Caenorhabditis elegans Hypothetical ...    27   6.1  
Z70038-3|CAA93883.2|  541|Caenorhabditis elegans Hypothetical pr...    26   8.1  
Z48717-1|CAA88603.1|  520|Caenorhabditis elegans Hypothetical pr...    26   8.1  
AF022973-4|AAC25798.1|  314|Caenorhabditis elegans Temporarily a...    26   8.1  

>L15201-3|AAA27944.1|  262|Caenorhabditis elegans Hypothetical
           protein C08C3.4 protein.
          Length = 262

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = +2

Query: 221 IQLARNFFNLFQIKSISARAYKQLLQQKNDIGVIKTKVMNIDKFRAYCEP 370
           + L   F N F+++ + AR    + Q    +   KTK+  +    + C+P
Sbjct: 111 VSLVLTFANRFEMRPVQARCENFIAQNATSLSRDKTKLFQVTCAMSQCDP 160


>Z82283-4|CAB05286.1|  689|Caenorhabditis elegans Hypothetical
           protein T23G4.4 protein.
          Length = 689

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 18  IVSLIVSLALPCELESVSVPP 80
           ++S  V+L LPC LES+ V P
Sbjct: 268 LMSFTVTLILPCPLESIFVRP 288


>Z72505-1|CAA96608.1|  338|Caenorhabditis elegans Hypothetical
           protein C50C10.2 protein.
          Length = 338

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +3

Query: 180 TINSDMF-FFSFYLLFNWPAISSIYFKLNL*VHVLTNSYC 296
           T++ ++F F  FY LFN     + YF LNL       S+C
Sbjct: 59  TMDHNIFAFIMFYFLFNILFFVADYFHLNLPTTGYVTSWC 98


>L14710-2|AAA28083.1|  124|Caenorhabditis elegans Hypothetical
           protein K02D10.2 protein.
          Length = 124

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 296 QQKNDIGVIKTKVMNIDKFRAYCE 367
           QQK DI  ++ K  NI+K +  CE
Sbjct: 15  QQKMDISTVEVKNNNIEKLKIGCE 38


>AF098999-2|AAC68728.3|  369|Caenorhabditis elegans Hypothetical
           protein W04C9.5 protein.
          Length = 369

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +3

Query: 21  VSLIVSLALPCELESVSVPPPPRTPLVFYGS*SSGHPCRRSRAS 152
           VSL V+LA+P +  S   PP P +P     S  +    RRS  S
Sbjct: 6   VSLPVALAIPQQFSSRLSPPSPASPAATRRSLPTSPISRRSLPS 49


>Z70038-3|CAA93883.2|  541|Caenorhabditis elegans Hypothetical
           protein ZK1067.4 protein.
          Length = 541

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 175 CKLLILTCFFFLSICY 222
           C LL++ CFF+ + C+
Sbjct: 34  CSLLLILCFFYATFCH 49


>Z48717-1|CAA88603.1|  520|Caenorhabditis elegans Hypothetical
           protein T10B9.1 protein.
          Length = 520

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 12/45 (26%), Positives = 27/45 (60%)
 Frame = +2

Query: 233 RNFFNLFQIKSISARAYKQLLQQKNDIGVIKTKVMNIDKFRAYCE 367
           ++F +LF    + ARA    +++++ +G  K++V+ +DK   + E
Sbjct: 275 QDFIDLF----LDARANVDFIEEESTLGFAKSEVLKVDKHLTFDE 315


>AF022973-4|AAC25798.1|  314|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 57 protein.
          Length = 314

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = +2

Query: 218 AIQLARNFFNLFQI---KSISARAYKQLLQQKNDIGV 319
           A+ LAR  FN+F I   KS   +  KQ+L + +DI V
Sbjct: 70  ALDLARRGFNIFLISRTKSKLVKTKKQILNKYSDIEV 106


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,437,897
Number of Sequences: 27780
Number of extensions: 153981
Number of successful extensions: 456
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)