Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0510
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   6.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   6.5  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 547 SKDSFQTYTH*YLAFIYVVKG*S*FTKAIRIF 452
           SK  F+T T+   AF+  VK  + F  A+ IF
Sbjct: 44  SKKEFKTRTYFIYAFVAPVKCLAFFCTALVIF 75


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 547 SKDSFQTYTH*YLAFIYVVKG*S*FTKAIRIF 452
           SK  F+T T+   AF+  VK  + F  A+ IF
Sbjct: 277 SKKEFKTRTYFIYAFVAPVKCLAFFCTALVIF 308


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 547 SKDSFQTYTH*YLAFIYVVKG*S*FTKAIRIF 452
           SK  F+T T+   AF+  VK  + F  A+ IF
Sbjct: 277 SKKEFKTRTYFIYAFVAPVKCLAFFCTALVIF 308


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = +2

Query: 71  IYKTKAIFILIFVK*YKLNNAQNSVFTRALPSIFGTICLQRNICYR 208
           +Y    + ++ F+K  K       + T+A  S    I    NICY+
Sbjct: 281 LYMVTKLVVVTFLKFIKKIQIFGIMITKACMSASNLIQRTPNICYK 326


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 507 PLYMWLRVDRNLLK 466
           P Y W++V RN+ K
Sbjct: 195 PTYKWMQVKRNVPK 208


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 507 PLYMWLRVDRNLLK 466
           P Y W++V RN+ K
Sbjct: 195 PTYKWMQVKRNVPK 208


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 507 PLYMWLRVDRNLLK 466
           P Y W++V RN+ K
Sbjct: 195 PTYKWMQVKRNVPK 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,511
Number of Sequences: 336
Number of extensions: 3187
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)