Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0510
         (643 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0143 + 5795028-5795108,5795197-5795403,5795878-5795976,579...    41   7e-04

>10_02_0143 +
           5795028-5795108,5795197-5795403,5795878-5795976,
           5796136-5796224,5797876-5797992,5798262-5798367,
           5798522-5798606,5798699-5798808,5799335-5799465,
           5799686-5799782,5800310-5800603
          Length = 471

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 17/32 (53%), Positives = 24/32 (75%)
 Frame = +2

Query: 359 WIADHARHVTRMLPGGMFVQGIFVTSDEDVFE 454
           W+A+HAR V+RML GGM V GI++ + E  F+
Sbjct: 89  WVAEHARQVSRMLLGGMTVIGIYIWASEASFK 120


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,055,602
Number of Sequences: 37544
Number of extensions: 313925
Number of successful extensions: 630
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)