Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0510
         (643 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ529299-1|ABF71985.1|  431|Homo sapiens TTG1A protein.                42   0.001
DQ323046-1|ABC50092.1|  454|Homo sapiens TTG1 protein.                 42   0.001
BC003397-1|AAH03397.2|  454|Homo sapiens chromosome 1 open readi...    42   0.001
AY854248-1|AAW30011.1|  454|Homo sapiens odorant response abnorm...    42   0.001
AL596220-3|CAI13121.1|  454|Homo sapiens chromosome 1 open readi...    42   0.001
AK000512-1|BAA91218.1|  335|Homo sapiens protein ( Homo sapiens ...    42   0.001

>DQ529299-1|ABF71985.1|  431|Homo sapiens TTG1A protein.
          Length = 431

 Score = 42.3 bits (95), Expect = 0.001
 Identities = 21/54 (38%), Positives = 33/54 (61%)
 Frame = +2

Query: 296 ESNYGLDKPEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFED 457
           E +  L  P+ AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D
Sbjct: 52  EQSENLKHPK-AK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELAND 103


>DQ323046-1|ABC50092.1|  454|Homo sapiens TTG1 protein.
          Length = 454

 Score = 42.3 bits (95), Expect = 0.001
 Identities = 21/54 (38%), Positives = 33/54 (61%)
 Frame = +2

Query: 296 ESNYGLDKPEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFED 457
           E +  L  P+ AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D
Sbjct: 52  EQSENLKHPK-AK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELAND 103


>BC003397-1|AAH03397.2|  454|Homo sapiens chromosome 1 open reading
           frame 27 protein.
          Length = 454

 Score = 42.3 bits (95), Expect = 0.001
 Identities = 21/54 (38%), Positives = 33/54 (61%)
 Frame = +2

Query: 296 ESNYGLDKPEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFED 457
           E +  L  P+ AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D
Sbjct: 52  EQSENLKHPK-AK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELAND 103


>AY854248-1|AAW30011.1|  454|Homo sapiens odorant response abnormal
           4 protein protein.
          Length = 454

 Score = 42.3 bits (95), Expect = 0.001
 Identities = 21/54 (38%), Positives = 33/54 (61%)
 Frame = +2

Query: 296 ESNYGLDKPEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFED 457
           E +  L  P+ AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D
Sbjct: 52  EQSENLKHPK-AK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELAND 103


>AL596220-3|CAI13121.1|  454|Homo sapiens chromosome 1 open reading
           frame 27 protein.
          Length = 454

 Score = 42.3 bits (95), Expect = 0.001
 Identities = 21/54 (38%), Positives = 33/54 (61%)
 Frame = +2

Query: 296 ESNYGLDKPEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFED 457
           E +  L  P+ AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D
Sbjct: 52  EQSENLKHPK-AK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELAND 103


>AK000512-1|BAA91218.1|  335|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20505 fis, clone KAT09459. ).
          Length = 335

 Score = 42.3 bits (95), Expect = 0.001
 Identities = 21/54 (38%), Positives = 33/54 (61%)
 Frame = +2

Query: 296 ESNYGLDKPEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFED 457
           E +  L  P+ AK L ++ E W  +HA  V+RMLPGG+ V G+F+ +  ++  D
Sbjct: 52  EQSENLKHPK-AK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELAND 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,927,220
Number of Sequences: 237096
Number of extensions: 1848000
Number of successful extensions: 3579
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3579
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)