Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0510
(643 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant respons... 44 7e-05
U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant respons... 44 7e-05
U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant respons... 44 7e-05
AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant respo... 44 7e-05
Z30215-7|CAA82940.1| 322|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z29560-13|CAA82665.1| 322|Caenorhabditis elegans Hypothetical p... 29 2.8
Z92831-1|CAB07367.1| 332|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 27 8.6
>U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant response
abnormal protein4, isoform a protein.
Length = 445
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +2
Query: 347 VSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYK 505
+ + W++DHA + RMLPGG+ V GI SD+ F D S + TL I K
Sbjct: 71 LEDEWMSDHAERLLRMLPGGIHVVGIAWFSDKKTFSDRK--SHIHKTLGRIQK 121
>U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant response
abnormal protein4, isoform c protein.
Length = 473
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +2
Query: 347 VSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYK 505
+ + W++DHA + RMLPGG+ V GI SD+ F D S + TL I K
Sbjct: 101 LEDEWMSDHAERLLRMLPGGIHVVGIAWFSDKKTFSDRK--SHIHKTLGRIQK 151
>U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant response
abnormal protein4, isoform b protein.
Length = 475
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +2
Query: 347 VSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYK 505
+ + W++DHA + RMLPGG+ V GI SD+ F D S + TL I K
Sbjct: 103 LEDEWMSDHAERLLRMLPGGIHVVGIAWFSDKKTFSDRK--SHIHKTLGRIQK 153
>AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant response
protein ODR-4 protein.
Length = 445
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +2
Query: 347 VSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYK 505
+ + W++DHA + RMLPGG+ V GI SD+ F D S + TL I K
Sbjct: 71 LEDEWMSDHAERLLRMLPGGIHVVGIAWFSDKKTFSDRK--SHIHKTLGRIQK 121
>Z30215-7|CAA82940.1| 322|Caenorhabditis elegans Hypothetical
protein K03H1.10 protein.
Length = 322
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 483 DRNLLKQLGSSKTSSSLVTNMP*TNIPPGSILVTCRAW 370
D ++ Q+G S S+ +TN +N+PP ++ V + W
Sbjct: 132 DGEVVHQIGVSTMSAGRITNGNISNLPPPNVPVRTKEW 169
>Z29560-13|CAA82665.1| 322|Caenorhabditis elegans Hypothetical
protein K03H1.10 protein.
Length = 322
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 483 DRNLLKQLGSSKTSSSLVTNMP*TNIPPGSILVTCRAW 370
D ++ Q+G S S+ +TN +N+PP ++ V + W
Sbjct: 132 DGEVVHQIGVSTMSAGRITNGNISNLPPPNVPVRTKEW 169
>Z92831-1|CAB07367.1| 332|Caenorhabditis elegans Hypothetical
protein F22G12.3 protein.
Length = 332
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/43 (18%), Positives = 26/43 (60%)
Frame = +3
Query: 162 LQYLEQYASKEIFAIGLILGQMTDARENVIHWLAHQKKKDQRL 290
++YL ++ I + + + ++ D +++VI W+ +++ ++L
Sbjct: 120 IEYLTEFLESPIVELSMDISELKDKQQSVIDWIKSRQRSIEKL 162
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical
protein K04G2.8b protein.
Length = 1188
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 521 SICLETVLTLMKG*SFTCLTST 586
S+ + +LTL+K SFTC+T+T
Sbjct: 358 SLLITRMLTLLKSASFTCVTNT 379
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical
protein K04G2.8a protein.
Length = 1186
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 521 SICLETVLTLMKG*SFTCLTST 586
S+ + +LTL+K SFTC+T+T
Sbjct: 358 SLLITRMLTLLKSASFTCVTNT 379
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 521 SICLETVLTLMKG*SFTCLTST 586
S+ + +LTL+K SFTC+T+T
Sbjct: 358 SLLITRMLTLLKSASFTCVTNT 379
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,485,161
Number of Sequences: 27780
Number of extensions: 299888
Number of successful extensions: 650
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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