Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0509
         (496 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2A046 Cluster: Putative uncharacterized protein; n=1; ...    33   2.7  
UniRef50_Q8QZQ9 Cluster: 209R; n=1; Invertebrate iridescent viru...    33   4.6  

>UniRef50_A2A046 Cluster: Putative uncharacterized protein; n=1;
           Microscilla marina ATCC 23134|Rep: Putative
           uncharacterized protein - Microscilla marina ATCC 23134
          Length = 251

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = -1

Query: 202 KISFPSVYLNIVVRAVVNGGRSEWRRTNIPLLKQKISIFFWHYRRIVD 59
           K+ FPS+Y+ +VV  V+ G R E    N   + + +S  F  Y ++VD
Sbjct: 167 KLKFPSIYIELVVMRVLKGKRKEHIEKNFNAVLEFLSSDF-IYEKVVD 213


>UniRef50_Q8QZQ9 Cluster: 209R; n=1; Invertebrate iridescent virus
           6|Rep: 209R - Chilo iridescent virus (CIV) (Insect
           iridescent virus type 6)
          Length = 1046

 Score = 32.7 bits (71), Expect = 4.6
 Identities = 27/73 (36%), Positives = 35/73 (47%)
 Frame = -1

Query: 274 LYNNIKFYPSHG*RFSKDLLQNPRKISFPSVYLNIVVRAVVNGGRSEWRRTNIPLLKQKI 95
           L N   F P  G  +   +L N  K+SFPSVY N +  A V G  SE R + I +L    
Sbjct: 755 LTNRDLFEPI-GFSYDSKMLTNGTKLSFPSVYHNDL--AFVFGSSSEGRESQINILSY-- 809

Query: 94  SIFFWHYRRIVDE 56
              F +  R VD+
Sbjct: 810 -TSFMNLHRTVDD 821


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,712,507
Number of Sequences: 1657284
Number of extensions: 9390698
Number of successful extensions: 18134
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18133
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)