Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0506
         (575 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001521-1|AAN71276.1|  297|Drosophila melanogaster LP12034p pro...   116   2e-26
AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM0288...   116   2e-26
AE013599-985|AAF58864.1|  297|Drosophila melanogaster CG2331-PB,...   116   2e-26
AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,...   116   2e-26
AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional...   115   4e-26
AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic ...   102   3e-22
AE013599-1427|AAF58547.1|  311|Drosophila melanogaster CG13169-P...    31   1.5  
AY058244-1|AAL13473.1|  796|Drosophila melanogaster GH01087p pro...    28   7.9  
AE014297-1919|AAF55113.1|  796|Drosophila melanogaster CG7262-PA...    28   7.9  

>BT001521-1|AAN71276.1|  297|Drosophila melanogaster LP12034p
           protein.
          Length = 297

 Score =  116 bits (280), Expect = 2e-26
 Identities = 57/88 (64%), Positives = 61/88 (69%)
 Frame = -2

Query: 571 KICQRAASWPFAXXXXXXXXXXXXXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSV 392
           +ICQRA                        + MDMDE+DPVPEI+ AHFEEAMKFARRSV
Sbjct: 182 EICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEEAMKFARRSV 241

Query: 391 SDNDIRKYEMFAQTLQQSRGFGTNFRFP 308
           SDNDIRKYEMFAQTLQQSRGFG NFRFP
Sbjct: 242 SDNDIRKYEMFAQTLQQSRGFGQNFRFP 269


>AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM02885
           protein.
          Length = 801

 Score =  116 bits (280), Expect = 2e-26
 Identities = 57/88 (64%), Positives = 61/88 (69%)
 Frame = -2

Query: 571 KICQRAASWPFAXXXXXXXXXXXXXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSV 392
           +ICQRA                        + MDMDE+DPVPEI+ AHFEEAMKFARRSV
Sbjct: 686 EICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEEAMKFARRSV 745

Query: 391 SDNDIRKYEMFAQTLQQSRGFGTNFRFP 308
           SDNDIRKYEMFAQTLQQSRGFG NFRFP
Sbjct: 746 SDNDIRKYEMFAQTLQQSRGFGQNFRFP 773


>AE013599-985|AAF58864.1|  297|Drosophila melanogaster CG2331-PB,
           isoform B protein.
          Length = 297

 Score =  116 bits (280), Expect = 2e-26
 Identities = 57/88 (64%), Positives = 61/88 (69%)
 Frame = -2

Query: 571 KICQRAASWPFAXXXXXXXXXXXXXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSV 392
           +ICQRA                        + MDMDE+DPVPEI+ AHFEEAMKFARRSV
Sbjct: 182 EICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEEAMKFARRSV 241

Query: 391 SDNDIRKYEMFAQTLQQSRGFGTNFRFP 308
           SDNDIRKYEMFAQTLQQSRGFG NFRFP
Sbjct: 242 SDNDIRKYEMFAQTLQQSRGFGQNFRFP 269


>AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,
           isoform A protein.
          Length = 801

 Score =  116 bits (280), Expect = 2e-26
 Identities = 57/88 (64%), Positives = 61/88 (69%)
 Frame = -2

Query: 571 KICQRAASWPFAXXXXXXXXXXXXXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSV 392
           +ICQRA                        + MDMDE+DPVPEI+ AHFEEAMKFARRSV
Sbjct: 686 EICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEEAMKFARRSV 745

Query: 391 SDNDIRKYEMFAQTLQQSRGFGTNFRFP 308
           SDNDIRKYEMFAQTLQQSRGFG NFRFP
Sbjct: 746 SDNDIRKYEMFAQTLQQSRGFGQNFRFP 773


>AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional
           endoplasmic reticulumATPase TER94 protein.
          Length = 801

 Score =  115 bits (277), Expect = 4e-26
 Identities = 56/88 (63%), Positives = 61/88 (69%)
 Frame = -2

Query: 571 KICQRAASWPFAXXXXXXXXXXXXXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSV 392
           +ICQRA                        + MDMDE+DPVPEI+ AHF+EAMKFARRSV
Sbjct: 686 EICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFQEAMKFARRSV 745

Query: 391 SDNDIRKYEMFAQTLQQSRGFGTNFRFP 308
           SDNDIRKYEMFAQTLQQSRGFG NFRFP
Sbjct: 746 SDNDIRKYEMFAQTLQQSRGFGQNFRFP 773


>AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic
           reticulum membranefusion protein protein.
          Length = 799

 Score =  102 bits (245), Expect = 3e-22
 Identities = 52/88 (59%), Positives = 57/88 (64%)
 Frame = -2

Query: 571 KICQRAASWPFAXXXXXXXXXXXXXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSV 392
           +ICQRA                        + MD DE+DPVPEI+ AHFEEAMKFARRSV
Sbjct: 685 EICQRACKLAIRQAIEAEIRREKERAENQNSAMD-DEDDPVPEITSAHFEEAMKFARRSV 743

Query: 391 SDNDIRKYEMFAQTLQQSRGFGTNFRFP 308
           SDNDIRKYEMFA   +QSRGFG NFRFP
Sbjct: 744 SDNDIRKYEMFAPDFEQSRGFGQNFRFP 771


>AE013599-1427|AAF58547.1|  311|Drosophila melanogaster CG13169-PA
           protein.
          Length = 311

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = -2

Query: 259 PTSRRRGVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTWRLAPAGS-XXX 83
           P+SR R  TT+C+A   +     ++   R  R   L     CR T  +W +   G+    
Sbjct: 200 PSSRCRTTTTSCSANSNVCGRWSSTRRCRRFRNRCLMERANCRTTVSSWNVVSLGNCSSI 259

Query: 82  XXXXXRTCSSKHTAAS 35
                 TC+S  +++S
Sbjct: 260 TVNNTGTCTSTFSSSS 275


>AY058244-1|AAL13473.1|  796|Drosophila melanogaster GH01087p
           protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 128 GATRRTNRQDVSSGLSRWWRCPEVASETQFSCTG 229
           G  + +++ DV+SGL R + CPE  + T  +  G
Sbjct: 563 GKRQSSDQNDVNSGLFRQFECPEFDTRTMAAQVG 596


>AE014297-1919|AAF55113.1|  796|Drosophila melanogaster CG7262-PA
           protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 128 GATRRTNRQDVSSGLSRWWRCPEVASETQFSCTG 229
           G  + +++ DV+SGL R + CPE  + T  +  G
Sbjct: 563 GKRQSSDQNDVNSGLFRQFECPEFDTRTMAAQVG 596


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,400,698
Number of Sequences: 53049
Number of extensions: 615163
Number of successful extensions: 2016
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2016
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)