Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0505
         (358 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   3.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   6.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    20   6.6  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    20   8.7  

>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 98  DVTGADEDRSKF 133
           D+T +D DRSK+
Sbjct: 59  DITTSDRDRSKY 70


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 203 MHYHRSHRNLKEQHL 159
           ++YHR HR +  Q L
Sbjct: 399 VNYHRVHRKIMVQSL 413


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 203 MHYHRSHRNLKEQHL 159
           ++YHR HR +  Q L
Sbjct: 124 VNYHRVHRKIMVQSL 138


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 35  TKYIFEITMSAN 70
           +KY+  +T+SAN
Sbjct: 169 SKYVLSVTVSAN 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,273
Number of Sequences: 336
Number of extensions: 1600
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)