Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0505
         (358 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024089-4|AAK09073.2|  239|Caenorhabditis elegans Hypothetical ...    33   0.044
AL024499-1|CAB54261.2|  295|Caenorhabditis elegans Hypothetical ...    32   0.10 
Z46787-16|CAO78703.1|  821|Caenorhabditis elegans Hypothetical p...    30   0.55 
Z35596-2|CAO78713.1|  821|Caenorhabditis elegans Hypothetical pr...    30   0.55 
Z49068-7|CAA88859.1|  552|Caenorhabditis elegans Hypothetical pr...    27   5.1  
Z81556-1|CAB04524.1|  965|Caenorhabditis elegans Hypothetical pr...    26   6.7  
AL110478-7|CAB54341.2|  343|Caenorhabditis elegans Hypothetical ...    26   6.7  

>AC024089-4|AAK09073.2|  239|Caenorhabditis elegans Hypothetical
           protein C36E6.2 protein.
          Length = 239

 Score = 33.5 bits (73), Expect = 0.044
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = +2

Query: 68  NREDTLRQFCDVTGAD---EDRSKFFLESSNWQLDVALSSFYENGGN 199
           +RE+ + +F ++        D + F+L+ +NW L  A+S FY+  G+
Sbjct: 19  DRENLIHKFEEIISPQMIPHDLAAFYLDLANWNLSTAISVFYDQNGD 65


>AL024499-1|CAB54261.2|  295|Caenorhabditis elegans Hypothetical
           protein H38K22.2a protein.
          Length = 295

 Score = 32.3 bits (70), Expect = 0.10
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +2

Query: 59  MSANREDTLRQFCDVTGADEDRSKFFLESSNWQLDVALSSFYEN 190
           + ++++  LRQF   T   E  S  FL  +NW ++ A++ +++N
Sbjct: 4   LKSDQKTKLRQFVQWTQVTEAVSLNFLAKANWNIEYAMTLYFDN 47


>Z46787-16|CAO78703.1|  821|Caenorhabditis elegans Hypothetical
           protein C30D11.1b protein.
          Length = 821

 Score = 29.9 bits (64), Expect = 0.55
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = -3

Query: 212 EPHMHYH-RSHRNLKEQHLIASLRILKRIYCD--LRQHR*HHKTDVMYLPYSQTW*FRIY 42
           +P +  H + H N+   H +A L +   +  +  L+  R HH T V Y P+   W + I 
Sbjct: 59  QPALRCHSKQHHNILSPHALAVLSLGADVLPEYKLQPTRIHHCTIVHYSPFKAVWDWIIL 118

Query: 41  IL 36
           +L
Sbjct: 119 LL 120


>Z35596-2|CAO78713.1|  821|Caenorhabditis elegans Hypothetical
           protein C30D11.1b protein.
          Length = 821

 Score = 29.9 bits (64), Expect = 0.55
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = -3

Query: 212 EPHMHYH-RSHRNLKEQHLIASLRILKRIYCD--LRQHR*HHKTDVMYLPYSQTW*FRIY 42
           +P +  H + H N+   H +A L +   +  +  L+  R HH T V Y P+   W + I 
Sbjct: 59  QPALRCHSKQHHNILSPHALAVLSLGADVLPEYKLQPTRIHHCTIVHYSPFKAVWDWIIL 118

Query: 41  IL 36
           +L
Sbjct: 119 LL 120


>Z49068-7|CAA88859.1|  552|Caenorhabditis elegans Hypothetical
           protein K01C8.8 protein.
          Length = 552

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +2

Query: 68  NREDTLRQFCDVTGADEDRSKFFLESSNWQLDVALSSFYENGGNAYEAPANP 223
           ++  ++  F  V+G +++ ++  LE  N   D     F+ + GN YE   NP
Sbjct: 395 SKSSSMDFFTTVSGLEKEMNEAKLELLNINFDEI--RFFSDNGNFYEVKMNP 444


>Z81556-1|CAB04524.1|  965|Caenorhabditis elegans Hypothetical
           protein F58G1.1 protein.
          Length = 965

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 240 SLFYQQRYGITTRLTSGAKVPEKRKNEN 323
           SLFYQ    ITT L +G +V   +K ++
Sbjct: 88  SLFYQYSVNITTELKNGKEVTFTKKGKD 115


>AL110478-7|CAB54341.2|  343|Caenorhabditis elegans Hypothetical
           protein Y26D4A.4 protein.
          Length = 343

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -3

Query: 170 EQHLIASLRILKRIYCDLRQHR*HHKTDVMYLPYSQTW*FRIYI 39
           E H IA    L +  C L   +  H    MY PY  T+  RIYI
Sbjct: 68  EGHRIAIKIPLSKRSCSLTTEQLLHNQYYMYYPYVFTFMKRIYI 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,876,433
Number of Sequences: 27780
Number of extensions: 146631
Number of successful extensions: 415
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)