Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0505
         (358 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        24   0.62 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   0.82 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   1.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   1.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   2.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   2.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   4.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   4.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   5.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   7.6  

>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.8 bits (49), Expect = 0.62
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 173 SSFYENGGNAYEAPANPTSAASFSVLPAAIWNHH 274
           SS   +G +A  +PA  T+++ +  + AA  +HH
Sbjct: 67  SSPQHSGSSASTSPAARTTSSMYPYVSAAAAHHH 100


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.4 bits (48), Expect = 0.82
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 201 HMRLQLIQRVRHHSLFYQQRY 263
           H+    + R RHH   Y Q Y
Sbjct: 764 HVAAYFLSRARHHDDLYSQSY 784


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 10/48 (20%), Positives = 20/48 (41%)
 Frame = +3

Query: 207 RLQLIQRVRHHSLFYQQRYGITTRLTSGAKVPEKRKNENLKYKVWDHR 350
           R+   +  RHH  + + R     R T        ++ E+ +   W+H+
Sbjct: 146 RINFTKLKRHHPRYKRPRTTFEPRATDSRHYDRYKEEESNENYNWEHK 193


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 173 SSFYENGGNAYEAPANPTSAASFSVLPAAI 262
           S  Y  GG++  +P++P+S  S SV P ++
Sbjct: 80  SPSYPGGGSSSPSPSSPSSFFS-SVSPTSL 108


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 128 KFFLESSNWQLDV 166
           K+F E  NW LD+
Sbjct: 538 KYFYEIDNWMLDL 550


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 128 KFFLESSNWQLDV 166
           K+F E  NW LD+
Sbjct: 538 KYFYEIDNWMLDL 550


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 288 GAKVPEKRKNENL 326
           G KVPEK+K + +
Sbjct: 207 GPKVPEKKKEDEI 219


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -3

Query: 209 PHMHYHRSHRNLKEQH 162
           PH H+H   ++L+  H
Sbjct: 350 PHHHHHHQTQSLQHLH 365


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -3

Query: 203  MHYHRSHRNLKEQHLI--ASLRILKRIYC 123
            +HY  +H NL E  L   A+   LK + C
Sbjct: 1439 LHYRTAHGNLDELQLSRHATSHELKGLLC 1467


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -3

Query: 203  MHYHRSHRNLKEQHLI--ASLRILKRIYC 123
            +HY  +H NL E  L   A+   LK + C
Sbjct: 1435 LHYRTAHGNLDELQLSRHATSHELKGLLC 1463


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 306 KRKNENLKYKVWD 344
           K KN +LKY  W+
Sbjct: 264 KWKNWDLKYNTWE 276


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,623
Number of Sequences: 438
Number of extensions: 1609
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)