Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0501
         (394 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0BGU9 Cluster: Chromosome undetermined scaffold_107, w...    35   0.48 
UniRef50_Q6CSS2 Cluster: Similar to sgd|S0004312 Saccharomyces c...    34   1.1  
UniRef50_A0D1D1 Cluster: Chromosome undetermined scaffold_34, wh...    33   1.5  
UniRef50_A0EAP7 Cluster: Chromosome undetermined scaffold_86, wh...    32   4.5  
UniRef50_Q1VVA0 Cluster: Putative lipd A biosynthesis related ex...    31   7.9  
UniRef50_A3C0F6 Cluster: Putative uncharacterized protein; n=1; ...    31   7.9  
UniRef50_A2Z2W5 Cluster: Putative uncharacterized protein; n=1; ...    31   7.9  

>UniRef50_A0BGU9 Cluster: Chromosome undetermined scaffold_107,
           whole genome shotgun sequence; n=6; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_107,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 779

 Score = 35.1 bits (77), Expect = 0.48
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 238 SKRNVLSIATLPYVYKLSHVTWENTHTQRASDFAPCASLNK 116
           ++RN+LS    PY+ KL +    NTH     DF P   L+K
Sbjct: 499 AERNILSYLNHPYIVKLRYAFQTNTHLCLLMDFCPGGDLSK 539


>UniRef50_Q6CSS2 Cluster: Similar to sgd|S0004312 Saccharomyces
            cerevisiae YLR320w hypothetical protein; n=1;
            Kluyveromyces lactis|Rep: Similar to sgd|S0004312
            Saccharomyces cerevisiae YLR320w hypothetical protein -
            Kluyveromyces lactis (Yeast) (Candida sphaerica)
          Length = 1452

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 15/63 (23%), Positives = 31/63 (49%)
 Frame = +1

Query: 58   EITTKILNFLQNETLMRLLLYLKTHKAQNHLRVAYVYFPTLRVIICKHRVMWQSITHYVY 237
            +I  + L  L  + +   +L L   KA+ ++   + Y    + + CK+ + W S+ HY  
Sbjct: 1009 DIYVESLEILNTDWIQTHVLQLLVSKAKENVTYLHYYCKIAKYLTCKNALTWWSLFHYNT 1068

Query: 238  FDN 246
            F++
Sbjct: 1069 FED 1071


>UniRef50_A0D1D1 Cluster: Chromosome undetermined scaffold_34, whole
           genome shotgun sequence; n=2; Oligohymenophorea|Rep:
           Chromosome undetermined scaffold_34, whole genome
           shotgun sequence - Paramecium tetraurelia
          Length = 291

 Score = 33.5 bits (73), Expect = 1.5
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -1

Query: 238 SKRNVLSIATLPYVYKLSHVTWENTHTQRASDFAPCASLNK 116
           ++RN+LS    P++ KL +    NTH     DF P   L+K
Sbjct: 128 TERNILSYLNHPFIVKLRYAFQTNTHLCLLMDFCPGGDLSK 168


>UniRef50_A0EAP7 Cluster: Chromosome undetermined scaffold_86, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_86,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 296

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 24/75 (32%), Positives = 37/75 (49%)
 Frame = +1

Query: 70  KILNFLQNETLMRLLLYLKTHKAQNHLRVAYVYFPTLRVIICKHRVMWQSITHYVYFDNI 249
           +I + L +  ++ L+ Y +  K   +L   Y    TLR  ICK R++   I HY+Y  N 
Sbjct: 67  RIQSKLHHPHIVELVEYFEDEKFI-YLVQEYCSKGTLRQEICKRRLLENEIYHYIYQLNE 125

Query: 250 KLLQ*QMIFI*YRDL 294
            L+      I +RDL
Sbjct: 126 ALIYLHRQRIVHRDL 140


>UniRef50_Q1VVA0 Cluster: Putative lipd A biosynthesis related
           exported protein; n=1; Psychroflexus torquis ATCC
           700755|Rep: Putative lipd A biosynthesis related
           exported protein - Psychroflexus torquis ATCC 700755
          Length = 293

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 58  EITTKILNFLQNETLMRLLLYLKTHKAQNHLRVA 159
           EIT + L F++N+ L     YL THK   H RV+
Sbjct: 258 EITDQFLKFVENQILEAPEYYLWTHKRWKHRRVS 291


>UniRef50_A3C0F6 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 246

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = -3

Query: 329 SSDSKSLQTLDQRSRY*INIICYCSNLMLSK*T*CVIDCHITLCLQIITRNVGKYTYATR 150
           SS+ + +Q     +   + I C+CS   L + T C++DC  +L    +    G Y+ +T 
Sbjct: 162 SSNMRQMQEYRHDNLQSVVITCFCSAKSLIELTCCILDCTTSLEYLTLDTTRGVYSCSTG 221

Query: 149 K 147
           K
Sbjct: 222 K 222


>UniRef50_A2Z2W5 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 393

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = -3

Query: 329 SSDSKSLQTLDQRSRY*INIICYCSNLMLSK*T*CVIDCHITLCLQIITRNVGKYTYATR 150
           SS+ + +Q     +   + I C+CS   L + T C++DC  +L    +    G Y+ +T 
Sbjct: 283 SSNMRQMQEYRHDNLQSVVITCFCSAKSLIELTCCILDCTTSLEYLTLDTTRGVYSCSTG 342

Query: 149 K 147
           K
Sbjct: 343 K 343


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,796,872
Number of Sequences: 1657284
Number of extensions: 5135111
Number of successful extensions: 11125
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11122
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)