Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0501
         (394 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   0.82 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   0.82 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   1.1  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   3.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   4.4  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 0.82
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 109 IALRFRFAENSIFLSLFRWCNNNNN 35
           +AL F+   NS F    +W   NNN
Sbjct: 89  VALAFQVILNSCFCDPAKWIRLNNN 113


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 0.82
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 109 IALRFRFAENSIFLSLFRWCNNNNN 35
           +AL F+   NS F    +W   NNN
Sbjct: 89  VALAFQVILNSCFCDPAKWIRLNNN 113


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = -1

Query: 154 RASDFAPCASLNKAAIALRFRFAENSIFLSLFRWCNNNNNRPFTC 20
           R  DF P     + ++ +RF   +N  F       N+ NNR  TC
Sbjct: 460 RGLDFQP-----RGSVFVRFTHLQNQDFTYKITVNNSGNNRMGTC 499


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 110 NRIKVSFCRKFNI 72
           N+I+++ CR FNI
Sbjct: 337 NKIEITACRLFNI 349


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 46  NNNNRPFTCTGCRNQ 2
           + N +PF C  CR +
Sbjct: 241 HTNEKPFECDKCRGR 255



 Score = 20.6 bits (41), Expect = 5.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 49  NNNNNRPFTCTGC 11
           +++ +RPFTC  C
Sbjct: 128 DSSRDRPFTCEVC 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,194
Number of Sequences: 336
Number of extensions: 1448
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)