Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0501
         (394 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           22   7.0  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     22   7.0  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    22   9.2  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    22   9.2  

>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 125 RRTRRKITCALRMCIF 172
           R+ R K TC L  C+F
Sbjct: 143 RKCRNKSTCELDHCVF 158


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 125 RRTRRKITCALRMCIF 172
           R+ R K TC L  C+F
Sbjct: 144 RKCRNKSTCELDHCVF 159


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 109 IALRFRFAENSIFLSLFRW 53
           +  R RFAE  +  S+F W
Sbjct: 47  VEARIRFAEEHLAASIFWW 65


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 109 IALRFRFAENSIFLSLFRW 53
           +  R RFAE  +  S+F W
Sbjct: 119 VEARIRFAEEHLAASIFWW 137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,790
Number of Sequences: 2352
Number of extensions: 5701
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)