Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0501
         (394 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101357-1|AAI01358.1|  582|Homo sapiens BTBD9 protein protein.        29   7.2  
BC101355-1|AAI01356.1|  544|Homo sapiens BTB (POZ) domain contai...    29   7.2  
BC101354-1|AAI01355.1|  544|Homo sapiens BTB (POZ) domain contai...    29   7.2  
AL079341-1|CAI20152.1|  316|Homo sapiens protein ( Human DNA seq...    29   7.2  
AK057507-1|BAB71514.1|  544|Homo sapiens protein ( Homo sapiens ...    29   7.2  
AB067467-1|BAB67773.1|  642|Homo sapiens KIAA1880 protein protein.     29   7.2  

>BC101357-1|AAI01358.1|  582|Homo sapiens BTBD9 protein protein.
          Length = 582

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = -1

Query: 127 SLNKAA---IALRFRFA--ENSIFLSLFRWCNNNN 38
           SL+K A   I LR  FA  E  IFL+L  WC +N+
Sbjct: 121 SLSKTALLNIVLRDSFAAPEKDIFLALLNWCKHNS 155


>BC101355-1|AAI01356.1|  544|Homo sapiens BTB (POZ) domain
           containing 9 protein.
          Length = 544

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = -1

Query: 127 SLNKAA---IALRFRFA--ENSIFLSLFRWCNNNN 38
           SL+K A   I LR  FA  E  IFL+L  WC +N+
Sbjct: 112 SLSKTALLNIVLRDSFAAPEKDIFLALLNWCKHNS 146


>BC101354-1|AAI01355.1|  544|Homo sapiens BTB (POZ) domain
           containing 9 protein.
          Length = 544

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = -1

Query: 127 SLNKAA---IALRFRFA--ENSIFLSLFRWCNNNN 38
           SL+K A   I LR  FA  E  IFL+L  WC +N+
Sbjct: 112 SLSKTALLNIVLRDSFAAPEKDIFLALLNWCKHNS 146


>AL079341-1|CAI20152.1|  316|Homo sapiens protein ( Human DNA
           sequence from clone RP1-319M7 on chromosome 6p21.1-21.3 
           Contains the 5' end of the gene for a novel protein
           (contains  ).
          Length = 316

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = -1

Query: 127 SLNKAA---IALRFRFA--ENSIFLSLFRWCNNNN 38
           SL+K A   I LR  FA  E  IFL+L  WC +N+
Sbjct: 112 SLSKTALLNIVLRDSFAAPEKDIFLALLNWCKHNS 146


>AK057507-1|BAB71514.1|  544|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32945 fis, clone TESTI2007867, weakly similar to
           RING CANAL PROTEIN. ).
          Length = 544

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = -1

Query: 127 SLNKAA---IALRFRFA--ENSIFLSLFRWCNNNN 38
           SL+K A   I LR  FA  E  IFL+L  WC +N+
Sbjct: 112 SLSKTALLNIVLRDSFAAPEKDIFLALLNWCKHNS 146


>AB067467-1|BAB67773.1|  642|Homo sapiens KIAA1880 protein protein.
          Length = 642

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = -1

Query: 127 SLNKAA---IALRFRFA--ENSIFLSLFRWCNNNN 38
           SL+K A   I LR  FA  E  IFL+L  WC +N+
Sbjct: 210 SLSKTALLNIVLRDSFAAPEKDIFLALLNWCKHNS 244


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,524,185
Number of Sequences: 237096
Number of extensions: 705205
Number of successful extensions: 1210
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)