BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0501 (394 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin syntha... 28 2.1 AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin syntha... 28 2.1 AF016684-16|AAB66213.1| 506|Caenorhabditis elegans Hypothetical... 27 4.8 >AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin synthase 2 protein. Length = 1668 Score = 28.3 bits (60), Expect = 2.1 Identities = 16/56 (28%), Positives = 25/56 (44%) Frame = -1 Query: 217 IATLPYVYKLSHVTWENTHTQRASDFAPCASLNKAAIALRFRFAENSIFLSLFRWC 50 + +P L + W R S F P +L K A L R ++ F+SL++ C Sbjct: 303 LVAIPVSLTLISLAWWQNFVHRDSVFPPVRTLAKFAQRLSERRSKTYAFVSLWKIC 358 >AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin synthase protein 2 protein. Length = 1668 Score = 28.3 bits (60), Expect = 2.1 Identities = 16/56 (28%), Positives = 25/56 (44%) Frame = -1 Query: 217 IATLPYVYKLSHVTWENTHTQRASDFAPCASLNKAAIALRFRFAENSIFLSLFRWC 50 + +P L + W R S F P +L K A L R ++ F+SL++ C Sbjct: 303 LVAIPVSLTLISLAWWQNFVHRDSVFPPVRTLAKFAQRLSERRSKTYAFVSLWKIC 358 >AF016684-16|AAB66213.1| 506|Caenorhabditis elegans Hypothetical protein F45C12.16 protein. Length = 506 Score = 27.1 bits (57), Expect = 4.8 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +1 Query: 70 KILNFLQNETLMRLLLYLKTHKAQNHLRVAYVYFPTLRVIICKHR 204 K ++FL N M +L K ++ + Y Y P L II KH+ Sbjct: 403 KNIDFLANLRSMAVLNDEPAIKIVSNQNLKYAYLPVLSTIITKHQ 447 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,703,560 Number of Sequences: 27780 Number of extensions: 132159 Number of successful extensions: 307 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 299 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 307 length of database: 12,740,198 effective HSP length: 74 effective length of database: 10,684,478 effective search space used: 598330768 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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