Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0500
         (454 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E2C0B1 Cluster: conserved hypothetical protein; ...    47   2e-04
UniRef50_UPI00005A9706 Cluster: PREDICTED: hypothetical protein ...    43   0.003
UniRef50_Q6BIA6 Cluster: Similarities with CA2492|IPF7224 Candid...    35   0.71 
UniRef50_Q96JR1 Cluster: PRO0996; n=1; Homo sapiens|Rep: PRO0996...    34   1.6  
UniRef50_Q3T4C9 Cluster: NADH-ubiquinone oxidoreductase chain 5;...    34   1.6  
UniRef50_Q972E3 Cluster: Putative uncharacterized protein ST1185...    33   2.9  
UniRef50_Q4UHK1 Cluster: Tpr-related protein family member, puta...    33   3.8  
UniRef50_A1CUU5 Cluster: Putative uncharacterized protein; n=2; ...    32   5.0  
UniRef50_Q950Q5 Cluster: NADH-ubiquinone oxidoreductase chain 5;...    32   6.6  
UniRef50_Q35099 Cluster: NADH-ubiquinone oxidoreductase chain 5;...    32   6.6  
UniRef50_Q6ZUP2 Cluster: CDNA FLJ43495 fis, clone PEBLM2000338; ...    31   8.7  

>UniRef50_UPI0000E2C0B1 Cluster: conserved hypothetical protein;
           n=1; Aspergillus terreus NIH2624|Rep: conserved
           hypothetical protein - Aspergillus terreus NIH2624
          Length = 127

 Score = 46.8 bits (106), Expect = 2e-04
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +2

Query: 284 HTIQHTLMILPQVPLRKPCYDFYFL 358
           H   H++MILPQV LRKPCYDFYFL
Sbjct: 103 HKDPHSVMILPQVHLRKPCYDFYFL 127


>UniRef50_UPI00005A9706 Cluster: PREDICTED: hypothetical protein
           XP_860064; n=1; Canis lupus familiaris|Rep: PREDICTED:
           hypothetical protein XP_860064 - Canis familiaris
          Length = 221

 Score = 43.2 bits (97), Expect = 0.003
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = +2

Query: 302 LMILPQVPLRKPCYDFYFL 358
           LMILPQV LRKPCYDFYFL
Sbjct: 203 LMILPQVHLRKPCYDFYFL 221


>UniRef50_Q6BIA6 Cluster: Similarities with CA2492|IPF7224 Candida
           albicans IPF7224; n=1; Debaryomyces hansenii|Rep:
           Similarities with CA2492|IPF7224 Candida albicans
           IPF7224 - Debaryomyces hansenii (Yeast) (Torulaspora
           hansenii)
          Length = 990

 Score = 35.1 bits (77), Expect = 0.71
 Identities = 15/48 (31%), Positives = 29/48 (60%)
 Frame = -3

Query: 395 RRCWEVDQT*SFRGSKSRNKVSVGEPAEGSLTCVVLCVICKYFIYLFY 252
           R+ W ++   SF     +NK+SV +  E ++T  ++C+IC Y++  +Y
Sbjct: 311 RKDWFINHLISFNNPNKKNKISVSKIDELNIT--LICLICYYYVPEYY 356


>UniRef50_Q96JR1 Cluster: PRO0996; n=1; Homo sapiens|Rep: PRO0996 -
           Homo sapiens (Human)
          Length = 79

 Score = 33.9 bits (74), Expect = 1.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 311 GSLTCVVLCVICKYFIYLFYIYTH 240
           G   CV +CV+C Y +Y+F  Y H
Sbjct: 18  GRYICVCVCVVCAYLVYMFTHYKH 41


>UniRef50_Q3T4C9 Cluster: NADH-ubiquinone oxidoreductase chain 5;
           n=1; Smittium culisetae|Rep: NADH-ubiquinone
           oxidoreductase chain 5 - Smittium culisetae (Gut fungus)
          Length = 649

 Score = 33.9 bits (74), Expect = 1.6
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -3

Query: 299 CVVLCVICKYFIYLFYIYTHAYIRSFLIFIVYPISHAL 186
           C + C IC+Y I +F+I  H + ++ L      I H++
Sbjct: 314 CFIACGICQYDIAIFHIVNHGFFKALLFLSAGAILHSI 351


>UniRef50_Q972E3 Cluster: Putative uncharacterized protein ST1185;
           n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
           protein ST1185 - Sulfolobus tokodaii
          Length = 109

 Score = 33.1 bits (72), Expect = 2.9
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +2

Query: 305 MILPQVPLRKPCYDF 349
           MI PQVPLR PCYDF
Sbjct: 1   MIQPQVPLRLPCYDF 15


>UniRef50_Q4UHK1 Cluster: Tpr-related protein family member,
           putative; n=8; Theileria|Rep: Tpr-related protein family
           member, putative - Theileria annulata
          Length = 468

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -3

Query: 383 EVDQT*SFRGSKSRNKVSVGEPAEGSLTCVVLCVICKYFIYLFY 252
           + +QT S  G  S+N  S G   E  ++ +++CV  +  +Y+FY
Sbjct: 216 QTEQTSSSNGECSKNDSSNGNDVEHVVSPMIMCVFAQGIVYVFY 259


>UniRef50_A1CUU5 Cluster: Putative uncharacterized protein; n=2;
           Neosartorya fischeri NRRL 181|Rep: Putative
           uncharacterized protein - Neosartorya fischeri (strain
           ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
           fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
          Length = 172

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -1

Query: 454 LPIE*FSEVFGPTRGGFTPVGVVGKLTKLDHLEEVKV 344
           LPIE   E FG  +G +  +   GKL K  HLEE  V
Sbjct: 30  LPIEWLGEAFGLAQGSWQRLPRAGKLVKPGHLEENSV 66


>UniRef50_Q950Q5 Cluster: NADH-ubiquinone oxidoreductase chain 5;
           n=1; Spizellomyces punctatus|Rep: NADH-ubiquinone
           oxidoreductase chain 5 - Spizellomyces punctatus
          Length = 652

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -3

Query: 296 VVLCVICKYFIYLFYIYTHAYIRSFLIFIVYPISHALA 183
           VV C + +Y + LF++  HA+ ++ L      + HALA
Sbjct: 312 VVACGLSQYSLALFHLCNHAFFKALLFLSAGAVIHALA 349


>UniRef50_Q35099 Cluster: NADH-ubiquinone oxidoreductase chain 5;
           n=31; Metazoa|Rep: NADH-ubiquinone oxidoreductase chain
           5 - Metridium senile (Brown sea anemone) (Frilled sea
           anemone)
          Length = 600

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -3

Query: 296 VVLCVICKYFIYLFYIYTHAYIRSFLIFIVYPISHALA 183
           V+ C + +Y I LF++  HA+ ++ L      + HALA
Sbjct: 314 VMACGLSQYSISLFHLMNHAFFKALLFLSAGSVIHALA 351


>UniRef50_Q6ZUP2 Cluster: CDNA FLJ43495 fis, clone PEBLM2000338;
           n=2; Homo sapiens|Rep: CDNA FLJ43495 fis, clone
           PEBLM2000338 - Homo sapiens (Human)
          Length = 148

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -3

Query: 299 CVVLCVICKYFIYLFYIYTHAYIRSFLIFIVYPISHALARVC 174
           C+ +C+    F+Y+ YIY + Y+    I +   +      VC
Sbjct: 12  CIYVCIYIHVFVYVCYIYLYVYVCVIYIHVCVCVCVLYIHVC 53


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,347,747
Number of Sequences: 1657284
Number of extensions: 7439276
Number of successful extensions: 20419
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20359
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)