Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0500
         (454 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   0.94 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   2.2  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   2.2  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.4 bits (53), Expect = 0.94
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 424  GPTRGGFTPVGVVGKLTKL 368
            G   GGF PVG+ G +T L
Sbjct: 2729 GAIVGGFAPVGIAGSITFL 2747


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 412  GGFTPVGVVGKLTKL 368
            GGF PVG+ G  T L
Sbjct: 2734 GGFAPVGIAGSFTFL 2748


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +3

Query: 369 SLVNFPTTPTGVKPPRVGPKTS 434
           SLVN  T  T   PP V P TS
Sbjct: 397 SLVNGGTPSTTTMPPSVAPTTS 418


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,389
Number of Sequences: 2352
Number of extensions: 8981
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)