Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0500
(454 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53337-5|AAP40522.1| 377|Caenorhabditis elegans Hypothetical pr... 29 1.6
U53337-4|AAA96186.2| 636|Caenorhabditis elegans Hypothetical pr... 29 1.6
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 29 2.1
AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical... 29 2.1
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 29 2.1
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z37139-7|CAA85485.1| 198|Caenorhabditis elegans Hypothetical pr... 27 6.4
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 27 6.4
AL132851-1|CAB60411.1| 403|Caenorhabditis elegans Hypothetical ... 27 8.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 8.4
AF068714-7|AAT68905.1| 592|Caenorhabditis elegans Egg laying de... 27 8.4
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 8.4
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 8.4
>U53337-5|AAP40522.1| 377|Caenorhabditis elegans Hypothetical
protein R02E12.2b protein.
Length = 377
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -1
Query: 322 NLRKDH*RVLYCV*YVNILFIYFIYIRMHTFDRS--*FLSFIRFLTLSRAFVATILNLTA 149
++R DH + + Y ++ + +F+Y++ FD S F +F T +A +A L+
Sbjct: 163 SIRHDH--LAKIILYSDVFYTFFLYVQSEVFDISSDAFSTFKELTTRHKAIIAEFLDSNY 220
Query: 148 DIIY 137
D +
Sbjct: 221 DTFF 224
>U53337-4|AAA96186.2| 636|Caenorhabditis elegans Hypothetical
protein R02E12.2a protein.
Length = 636
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -1
Query: 322 NLRKDH*RVLYCV*YVNILFIYFIYIRMHTFDRS--*FLSFIRFLTLSRAFVATILNLTA 149
++R DH + + Y ++ + +F+Y++ FD S F +F T +A +A L+
Sbjct: 422 SIRHDH--LAKIILYSDVFYTFFLYVQSEVFDISSDAFSTFKELTTRHKAIIAEFLDSNY 479
Query: 148 DIIY 137
D +
Sbjct: 480 DTFF 483
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +3
Query: 27 PQTQNNTVISVSVMVFCSARIVLCVCCRARAVRSSIRYIMSAVRFNIVATNARESVRNRI 206
PQ Q + S + F ++++V C AR V +I + + AT +SV N +
Sbjct: 728 PQVQERVIQSATKCAFATSQLVAC----ARVVAPTIDNNACQQQLSTAATEVTQSVNNLL 783
Query: 207 ND 212
+D
Sbjct: 784 HD 785
>AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical
protein Y71G12B.11b protein.
Length = 996
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +3
Query: 27 PQTQNNTVISVSVMVFCSARIVLCVCCRARAVRSSIRYIMSAVRFNIVATNARESVRNRI 206
PQ Q + S + F ++++V C AR V +I + + AT +SV N +
Sbjct: 728 PQVQERVIQSATKCAFATSQLVAC----ARVVAPTIDNNACQQQLSTAATEVTQSVNNLL 783
Query: 207 ND 212
+D
Sbjct: 784 HD 785
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +3
Query: 27 PQTQNNTVISVSVMVFCSARIVLCVCCRARAVRSSIRYIMSAVRFNIVATNARESVRNRI 206
PQ Q + S + F ++++V C AR V +I + + AT +SV N +
Sbjct: 728 PQVQERVIQSATKCAFATSQLVAC----ARVVAPTIDNNACQQQLSTAATEVTQSVNNLL 783
Query: 207 ND 212
+D
Sbjct: 784 HD 785
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 95 MRVLPCACSTQQY*IYNVSSQIQYRR 172
++V+PC + Q VS+Q+QYRR
Sbjct: 3 LKVIPCTLTKNQEVFKCVSAQLQYRR 28
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 95 MRVLPCACSTQQY*IYNVSSQIQYRR 172
++V+PC + Q VS+Q+QYRR
Sbjct: 3 LKVIPCTLTKNQEVFKCVSAQLQYRR 28
>Z37139-7|CAA85485.1| 198|Caenorhabditis elegans Hypothetical
protein C14B1.2 protein.
Length = 198
Score = 27.1 bits (57), Expect = 6.4
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 418 TRGGFTPV-GVVGKLTKLDHLEEVKVVTRFP*GNLRKDH*RVLYCV*YVNILFIYFIYI 245
TRG F V G+ GK T ++T NL+KD ++ Y+NI+ + IY+
Sbjct: 57 TRGMFDSVTGLFGKSTATSRRSSDGLMT-----NLKKDEATRIWFAVYLNIILVALIYV 110
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 95 MRVLPCACSTQQY*IYNVSSQIQYRR 172
++V+PC + Q VS+Q+QYRR
Sbjct: 3 LKVIPCTLTKNQEVFKCVSAQLQYRR 28
>AL132851-1|CAB60411.1| 403|Caenorhabditis elegans Hypothetical
protein Y53H1B.1 protein.
Length = 403
Score = 26.6 bits (56), Expect = 8.4
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +3
Query: 276 TYHTQYNTR**SFRRFPYGNLVTTFTSSK*SSLVNFPTTPTGVKPPRVGPKTSLNHS 446
TY+ N F + + V+T+ S+ +N G PPR GP S S
Sbjct: 230 TYNKDNNVAYAQVNTFKFADKVSTYFQCAVSTCMNTEGMCDGKTPPRCGPAGSFRSS 286
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 26.6 bits (56), Expect = 8.4
Identities = 15/62 (24%), Positives = 26/62 (41%)
Frame = +3
Query: 267 KIFTYHTQYNTR**SFRRFPYGNLVTTFTSSK*SSLVNFPTTPTGVKPPRVGPKTSLNHS 446
++ YHT R+ P ++ TF+S K +V G+ + P +N S
Sbjct: 145 QLMKYHTWLTMNVNERRKIPIKLIIKTFSSGKPEKMVQKCLNDLGLGGDKYTPARVINRS 204
Query: 447 IG 452
+G
Sbjct: 205 MG 206
>AF068714-7|AAT68905.1| 592|Caenorhabditis elegans Egg laying
defective protein 8,isoform c protein.
Length = 592
Score = 26.6 bits (56), Expect = 8.4
Identities = 15/62 (24%), Positives = 26/62 (41%)
Frame = +3
Query: 267 KIFTYHTQYNTR**SFRRFPYGNLVTTFTSSK*SSLVNFPTTPTGVKPPRVGPKTSLNHS 446
++ YHT R+ P ++ TF+S K +V G+ + P +N S
Sbjct: 145 QLMKYHTWLTMNVNERRKIPIKLIIKTFSSGKPEKMVQKCLNDLGLGGDKYTPARVINRS 204
Query: 447 IG 452
+G
Sbjct: 205 MG 206
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 26.6 bits (56), Expect = 8.4
Identities = 15/62 (24%), Positives = 26/62 (41%)
Frame = +3
Query: 267 KIFTYHTQYNTR**SFRRFPYGNLVTTFTSSK*SSLVNFPTTPTGVKPPRVGPKTSLNHS 446
++ YHT R+ P ++ TF+S K +V G+ + P +N S
Sbjct: 145 QLMKYHTWLTMNVNERRKIPIKLIIKTFSSGKPEKMVQKCLNDLGLGGDKYTPARVINRS 204
Query: 447 IG 452
+G
Sbjct: 205 MG 206
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 26.6 bits (56), Expect = 8.4
Identities = 15/62 (24%), Positives = 26/62 (41%)
Frame = +3
Query: 267 KIFTYHTQYNTR**SFRRFPYGNLVTTFTSSK*SSLVNFPTTPTGVKPPRVGPKTSLNHS 446
++ YHT R+ P ++ TF+S K +V G+ + P +N S
Sbjct: 145 QLMKYHTWLTMNVNERRKIPIKLIIKTFSSGKPEKMVQKCLNDLGLGGDKYTPARVINRS 204
Query: 447 IG 452
+G
Sbjct: 205 MG 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,011,489
Number of Sequences: 27780
Number of extensions: 195515
Number of successful extensions: 675
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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