Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0497
         (566 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L41867-1|AAA86427.1|  425|Drosophila melanogaster extra sex comb...    29   5.8  
AY113528-1|AAM29533.1|  396|Drosophila melanogaster RE60671p pro...    29   5.8  
AY069796-1|AAL39941.1|  425|Drosophila melanogaster SD03549p pro...    29   5.8  
AE014134-2101|AAF53124.1|  425|Drosophila melanogaster CG14941-P...    29   5.8  

>L41867-1|AAA86427.1|  425|Drosophila melanogaster extra sex combs
           protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 476 TNSTLNRQRTPSGSTTPVRSGQQTAVSR 393
           TNST +R ++PS ST   R G+++  S+
Sbjct: 28  TNSTTSRSKSPSSSTRSKRRGRRSTKSK 55


>AY113528-1|AAM29533.1|  396|Drosophila melanogaster RE60671p
           protein.
          Length = 396

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 344 ASPACRTPTRPTGSAVNETPRSAVPTAPALCCPTAS 451
           A+PA   PT PT   +   P S+VP       PTA+
Sbjct: 360 ATPAPAPPTAPTLPTIPLPPASSVPAPATAATPTAN 395


>AY069796-1|AAL39941.1|  425|Drosophila melanogaster SD03549p
           protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 476 TNSTLNRQRTPSGSTTPVRSGQQTAVSR 393
           TNST +R ++PS ST   R G+++  S+
Sbjct: 28  TNSTTSRSKSPSSSTRSKRRGRRSTKSK 55


>AE014134-2101|AAF53124.1|  425|Drosophila melanogaster CG14941-PA
           protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 476 TNSTLNRQRTPSGSTTPVRSGQQTAVSR 393
           TNST +R ++PS ST   R G+++  S+
Sbjct: 28  TNSTTSRSKSPSSSTRSKRRGRRSTKSK 55


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,721,395
Number of Sequences: 53049
Number of extensions: 398090
Number of successful extensions: 1644
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1643
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)