Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0497
         (566 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   1.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   3.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.6  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 190 SKASKRLALHRLHLSSVISQSRC 258
           S     LA H  HLSS + +S C
Sbjct: 277 SSLQPSLASHHSHLSSALGRSAC 299


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 145 LALCENRAAGIGIATSADYDIFVLKL 68
           +A+ E      G+A  A YD  VLKL
Sbjct: 311 IAIKEKLVKDSGVAKDAAYDNIVLKL 336


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 556 TKWSGSFPSNDLQTP 512
           TK+ G +P+  +Q P
Sbjct: 723 TKYHGQYPNTQIQNP 737


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,714
Number of Sequences: 438
Number of extensions: 2325
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)